RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 ERVK-10P10266 1014 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 HGFP14210 728 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 PGAM1P18669 254 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 OGNP20774 298 aaKnown RBP11.38□□□□□ -0.59
UBA3-211ENST00000493957 HALP42357 657 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 SLC1A2P43004 574 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 TTPAP49638 278 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 INHBCP55103 352 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 GFERP55789 205 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 PPP1CAP62136 330 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 MPP1Q00013 466 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 ZFP36L1Q07352 338 aaKnown RBP11.38□□□□□ -0.59
UBA3-211ENST00000493957 CYP4F3Q08477 520 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 HIF1AQ16665 826 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 LONRF1Q17RB8 773 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 WHAMMP3Q1A5X7 153 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 DNAJC21Q5F1R6 531 aaKnown RBP11.38□□□□□ -0.59
UBA3-211ENST00000493957 AARS2Q5JTZ9 985 aaKnown RBP11.38□□□□□ -0.59
UBA3-211ENST00000493957 NEPROQ6NW34 567 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 FOXR1Q6PIV2 292 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 UNC5AQ6ZN44 842 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 CILP2Q8IUL8 1156 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.38□□□□□ -0.59
UBA3-211ENST00000493957 NOA1Q8NC60 698 aaKnown RBP11.38□□□□□ -0.59
UBA3-211ENST00000493957 RCBTB1Q8NDN9 531 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 PHC3Q8NDX5 983 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 WDR48Q8TAF3 677 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 RSC1A1Q92681 617 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 FAM136AQ96C01 138 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 PRR11Q96HE9 360 aaPredicted RBP11.38□□□□□ -0.59
UBA3-211ENST00000493957 CCDC74BQ96LY2 380 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 BIRC8Q96P09 236 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 LRRC1Q9BTT6 524 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 STN1Q9H668 368 aaKnown RBP11.38□□□□□ -0.59
UBA3-211ENST00000493957 FBXO6Q9NRD1 293 aaPredicted RBP11.38□□□□□ -0.59
UBA3-211ENST00000493957 C20orf96Q9NUD7 363 aaPredicted RBP11.38□□□□□ -0.59
UBA3-211ENST00000493957 GALPQ9UBC7 116 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 ACSL5Q9ULC5 683 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 CDYLQ9Y232 598 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 CRYL1Q9Y2S2 319 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 TEX264Q9Y6I9 313 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 FAM169AQ9Y6X4 670 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 HEATR5BQ9P2D3 2071 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 EPG5Q9HCE0 2579 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 MAGEB16A2A368 324 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 DUX1O43812 170 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 S1PR4O95977 384 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 PAMP19021 973 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 RPS3P23396 243 aaKnown RBP eCLIP11.37□□□□□ -0.59
UBA3-211ENST00000493957 FMO4P31512 558 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 ETV5P41161 510 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 ABCG1P45844 678 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 PPM1FP49593 454 aaPredicted RBP11.37□□□□□ -0.59
UBA3-211ENST00000493957 ARL4CP56559 192 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 GABREP78334 506 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 PDIA2Q13087 525 aaKnown RBP11.37□□□□□ -0.59
UBA3-211ENST00000493957 C16orf72Q14CZ0 275 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 HSP90AA5PQ58FG0 334 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 SNAP47Q5SQN1 464 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 PHF19Q5T6S3 580 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 ARMC3Q5W041 872 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 PTRHD1Q6GMV3 140 aaKnown RBP11.37□□□□□ -0.59
UBA3-211ENST00000493957 MRNIPQ6NTE8 343 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 ZNF549Q6P9A3 640 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 TRMT10BQ6PF06 316 aaKnown RBP11.37□□□□□ -0.59
UBA3-211ENST00000493957 ZDHHC24Q6UX98 284 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 MAATS1Q7Z4T9 603 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 PDZD3Q86UT5 571 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 PIM3Q86V86 326 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 KCNMB4Q86W47 210 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 PDIK1LQ8N165 341 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 OR10G6Q8NH81 332 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 NCSTNQ92542 709 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 SH3KBP1Q96B97 665 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 AHCYL2Q96HN2 611 aaKnown RBP11.37□□□□□ -0.59
UBA3-211ENST00000493957 TTC1Q99614 292 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 VPS37BQ9H9H4 285 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 UCK1Q9HA47 277 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 IARS2Q9NSE4 1012 aaKnown RBP11.37□□□□□ -0.59
UBA3-211ENST00000493957 WHRNQ9P202 907 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 KLHL3Q9UH77 587 aa11.37□□□□□ -0.59
UBA3-211ENST00000493957 KLHL33A6NCF5 533 aa11.36□□□□□ -0.59
UBA3-211ENST00000493957 A8MU76 341 aa11.36□□□□□ -0.59
UBA3-211ENST00000493957 E7ESA3 106 aa11.36□□□□□ -0.59
UBA3-211ENST00000493957 TAF4O00268 1085 aa11.36□□□□□ -0.59
UBA3-211ENST00000493957 LIN7AO14910 233 aaPredicted RBP11.36□□□□□ -0.59
UBA3-211ENST00000493957 BRINP1O60477 761 aa11.36□□□□□ -0.59
UBA3-211ENST00000493957 UBXN7O94888 489 aa11.36□□□□□ -0.59
UBA3-211ENST00000493957 PROS1P07225 676 aa11.36□□□□□ -0.59
UBA3-211ENST00000493957 THRAP10827 490 aa11.36□□□□□ -0.59
UBA3-211ENST00000493957 ITIH1P19827 911 aa11.36□□□□□ -0.59
UBA3-211ENST00000493957 AOAHP28039 575 aa11.36□□□□□ -0.59
UBA3-211ENST00000493957 ACADLP28330 430 aa11.36□□□□□ -0.59
UBA3-211ENST00000493957 CCKBRP32239 447 aa11.36□□□□□ -0.59
UBA3-211ENST00000493957 LEPRP48357 1165 aaKnown RBP11.36□□□□□ -0.59
UBA3-211ENST00000493957 LIMK2P53671 638 aa11.36□□□□□ -0.59
UBA3-211ENST00000493957 EPHA4P54764 986 aa11.36□□□□□ -0.59
UBA3-211ENST00000493957 GPLD1P80108 840 aa11.36□□□□□ -0.59
UBA3-211ENST00000493957 HSPA14Q0VDF9 509 aa11.36□□□□□ -0.59
UBA3-211ENST00000493957 SQSTM1Q13501 440 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms