RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 EIF2S3P41091 472 aaKnown RBP12.59□□□□□ -0.39
COL5A1-206ENST00000465877 MORF4L2Q15014 288 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 RNF187Q5TA31 235 aaPredicted RBP12.59□□□□□ -0.39
COL5A1-206ENST00000465877 MRNIPQ6NTE8 343 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 ZNF449Q6P9G9 518 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 PCGF5Q86SE9 256 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 PLXDC1Q8IUK5 500 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 AGBL5Q8NDL9 886 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 ZNF248Q8NDW4 579 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 FGF11Q92914 225 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 C16orf45Q96MC5 204 aaPredicted RBP12.59□□□□□ -0.39
COL5A1-206ENST00000465877 FCRL3Q96P31 734 aaPredicted RBP12.59□□□□□ -0.39
COL5A1-206ENST00000465877 TGM7Q96PF1 710 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 KRT12Q99456 494 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 TSSK1BQ9BXA7 367 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 KIR3DX1Q9H7L2 352 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 GNPTGQ9UJJ9 305 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 MAD1L1Q9Y6D9 718 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 RPS6KL1Q9Y6S9 549 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 URB1O60287 2271 aaKnown RBP12.58□□□□□ -0.4
COL5A1-206ENST00000465877 CHD6Q8TD26 2715 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 A0A087WV48 116 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 SLC5A10A0PJK1 596 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 A8MU76 341 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 NDUFS3O75489 264 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 BANF1O75531 89 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 ANKRD34CP0C6C1 535 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 RPS3P23396 243 aaKnown RBP eCLIP12.58□□□□□ -0.4
COL5A1-206ENST00000465877 NDUFS1P28331 727 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 CSTF2P33240 577 aaKnown RBP eCLIP12.58□□□□□ -0.4
COL5A1-206ENST00000465877 ARCN1P48444 511 aaKnown RBP12.58□□□□□ -0.4
COL5A1-206ENST00000465877 CD151P48509 253 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 MAPK10P53779 464 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 EIF3BP55884 814 aaKnown RBP12.58□□□□□ -0.4
COL5A1-206ENST00000465877 PPP1CAP62136 330 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 C2orf54Q08AI8 447 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 BRD3Q15059 726 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 ANKRD20A4Q4UJ75 823 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 ZNF470Q6ECI4 717 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 IRGCQ6NXR0 463 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 NAPRTQ6XQN6 538 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 ARHGAP22Q7Z5H3 698 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 TMEM135Q86UB9 458 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 FAM129CQ86XR2 697 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 LPGAT1Q92604 370 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 STAMBPL1Q96FJ0 436 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 SNF8Q96H20 258 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 SIGLEC10Q96LC7 697 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 C9orf72Q96LT7 481 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 HGH1Q9BTY7 390 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 P2RY12Q9H244 342 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 SLC24A2Q9UI40 661 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 PCDHGA7Q9Y5G6 932 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 COLEC10Q9Y6Z7 277 aa12.58□□□□□ -0.4
COL5A1-206ENST00000465877 PTPRQQ9UMZ3 2332 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 ZCWPW2A0A1B0GU75 182 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 MAGEB16A2A368 324 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 OR5K3A6NET4 321 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 IQCF5A8MTL0 148 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 CAPN5O15484 640 aaPredicted RBP12.57□□□□□ -0.4
COL5A1-206ENST00000465877 RRP8O43159 456 aaKnown RBP12.57□□□□□ -0.4
COL5A1-206ENST00000465877 PRAMEF10O60809 474 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 SEC31AO94979 1220 aaKnown RBP12.57□□□□□ -0.4
COL5A1-206ENST00000465877 CCL4P13236 92 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 PGAM1P18669 254 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 SLC5A2P31639 672 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 LEPRP48357 1165 aaKnown RBP12.57□□□□□ -0.4
COL5A1-206ENST00000465877 CSE1LP55060 971 aaKnown RBP12.57□□□□□ -0.4
COL5A1-206ENST00000465877 DHX9Q08211 1270 aaKnown RBP12.57□□□□□ -0.4
COL5A1-206ENST00000465877 KRT33BQ14525 404 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 CRYMQ14894 314 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 DNAJC21Q5F1R6 531 aaKnown RBP12.57□□□□□ -0.4
COL5A1-206ENST00000465877 CTSL3PQ5NE16 218 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 PTRHD1Q6GMV3 140 aaKnown RBP12.57□□□□□ -0.4
COL5A1-206ENST00000465877 KLHL35Q6PF15 583 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 PRSS42Q7Z5A4 293 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 OOSP2Q86WS3 158 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 LRRC6Q86X45 466 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 CILP2Q8IUL8 1156 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 KRT222Q8N1A0 295 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 ACVR1CQ8NER5 493 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 SPATA4Q8NEY3 305 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 ZFPM2Q8WW38 1151 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 KCNE4Q8WWG9 221 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 TFGQ92734 400 aaPredicted RBP12.57□□□□□ -0.4
COL5A1-206ENST00000465877 PMEPA1Q969W9 287 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 NAF1Q96HR8 494 aaKnown RBP12.57□□□□□ -0.4
COL5A1-206ENST00000465877 CARD6Q9BX69 1037 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 TRIM31Q9BZY9 425 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 RAB33BQ9H082 229 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 FOXJ2Q9P0K8 574 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 EPHA6Q9UF33 1036 aa12.57□□□□□ -0.4
COL5A1-206ENST00000465877 EFCAB7A8K855 629 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 C9orf172C9J069 976 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 SMAPO00193 183 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 PFDN6O15212 129 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 RASSF9O75901 435 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 FGF3P11487 239 aaPredicted RBP12.56□□□□□ -0.4
COL5A1-206ENST00000465877 CCR7P32248 378 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 SLC1A2P43004 574 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms