RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 C1orf127Q8N9H9 656 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 EIF1ADQ8N9N8 165 aaKnown RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 MCUQ8NE86 351 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 RHPN1Q8TCX5 695 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 SNX33Q8WV41 574 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 MARS2Q96GW9 593 aaKnown RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 FAM84BQ96KN1 310 aaPredicted RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 ACBD6Q9BR61 282 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 LRFN3Q9BTN0 628 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 CNPPD1Q9BV87 410 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 POLDIP3Q9BY77 421 aaKnown RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 LRRC2Q9BYS8 371 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 BTBD1Q9H0C5 482 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 TDRD3Q9H7E2 651 aaKnown RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 CATSPERBQ9H7T0 1116 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 KLHL1Q9NR64 748 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 TBC1D13Q9NVG8 400 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 FGFR1OP2Q9NVK5 253 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 DZANK1Q9NVP4 752 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 SCML1Q9UN30 329 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 KLHL20Q9Y2M5 609 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 POLR3KQ9Y2Y1 108 aaPredicted RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 ATP23Q9Y6H3 246 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 TEX13CA0A0J9YWL9 993 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 TMEM82A0PJX8 343 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 SMIM30A4D0T7 59 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 POM121BA6NF01 834 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 WASHC1A8K0Z3 465 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 WDR64B1ANS9 1081 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 WASH3PC4AMC7 463 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 NEDD8-MDP1E9PL57 170 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 AGRPO00253 132 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 POLRMTO00411 1230 aaKnown RBP4.9□□□□□ -1.63
EPHA3-202ENST00000452448 MEIS1O00470 390 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 KHNYNO15037 678 aaKnown RBP4.9□□□□□ -1.63
EPHA3-202ENST00000452448 HSPA12AO43301 675 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 COCHO43405 550 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 KCNAB3O43448 404 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 AKAP8O43823 692 aaKnown RBP4.9□□□□□ -1.63
EPHA3-202ENST00000452448 B3GALT2O43825 422 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF862O60290 1169 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 DFNA5O60443 496 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 GAS7O60861 476 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 HUS1O60921 280 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF623O75123 536 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 NDUFS3O75489 264 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 CIB2O75838 187 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 NXPH2O95156 264 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 KCNK5O95279 499 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 ONECUT2O95948 504 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 PEX11BO96011 259 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 AGTP01019 485 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 CKMP06732 381 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 RBP1P09455 135 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 FBP1P09467 338 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 CBSLP0DN79 551 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 PIM1P11309 404 aaPredicted RBP4.9□□□□□ -1.63
EPHA3-202ENST00000452448 TCF4P15884 667 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 RHOQP17081 205 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 DRD4P21917 467 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 GRNP28799 593 aaKnown RBP4.9□□□□□ -1.63
EPHA3-202ENST00000452448 ICAM3P32942 547 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 CBSP35520 551 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 CSKP41240 450 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 CRYBB1P53674 252 aaPredicted RBP4.9□□□□□ -1.63
EPHA3-202ENST00000452448 SLC5A3P53794 718 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 EPHA5P54756 1037 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 PSME3P61289 254 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 TRAF2Q12933 501 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 LCP2Q13094 533 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 CA9Q16790 459 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 BMT2Q1RMZ1 405 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 WASHC2DQ5SRD0 308 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 HP1BP3Q5SSJ5 553 aaPredicted RBP4.9□□□□□ -1.63
EPHA3-202ENST00000452448 PDZK1Q5T2W1 519 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 IRAK1BP1Q5VVH5 260 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 RNLSQ5VYX0 342 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 LIPJQ5W064 366 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 ARHGAP17Q68EM7 881 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 FAM109BQ6ICB4 259 aaPredicted RBP4.9□□□□□ -1.63
EPHA3-202ENST00000452448 INTS5Q6P9B9 1019 aaKnown RBP4.9□□□□□ -1.63
EPHA3-202ENST00000452448 TMEM65Q6PI78 240 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 IL20RBQ6UXL0 311 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 WASH2PQ6VEQ5 465 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 PRSS42Q7Z5A4 293 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 CUZD1Q86UP6 607 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 ANKRD46Q86W74 232 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 SLC13A5Q86YT5 568 aaPredicted RBP4.9□□□□□ -1.63
EPHA3-202ENST00000452448 RASAL3Q86YV0 1011 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 KLBQ86Z14 1044 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 CNTN4Q8IWV2 1026 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 C12orf29Q8N999 325 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 ZFP28Q8NHY6 868 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 ST7LQ8TDW4 575 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 JADE3Q92613 823 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 PPP1R14AQ96A00 147 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 CCDC51Q96ER9 411 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 BSCL2Q96G97 398 aaPredicted RBP4.9□□□□□ -1.63
EPHA3-202ENST00000452448 TMEM41AQ96HV5 264 aa4.9□□□□□ -1.63
EPHA3-202ENST00000452448 KCNS3Q9BQ31 491 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms