RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 TUBB2AQ13885 445 aa20.5■□□□□ 0.87
VSX1-206ENST00000444511 GPR33Q49SQ1 333 aa20.5■□□□□ 0.87
VSX1-206ENST00000444511 TMTC4Q5T4D3 741 aa20.5■□□□□ 0.87
VSX1-206ENST00000444511 CAPRIN2Q6IMN6 1127 aaKnown RBP20.5■□□□□ 0.87
VSX1-206ENST00000444511 KIAA1328Q86T90 577 aa20.5■□□□□ 0.87
VSX1-206ENST00000444511 CARFQ8N187 725 aa20.5■□□□□ 0.87
VSX1-206ENST00000444511 LRRC57Q8N9N7 239 aa20.5■□□□□ 0.87
VSX1-206ENST00000444511 TTC13Q8NBP0 860 aa20.5■□□□□ 0.87
VSX1-206ENST00000444511 TUBB2BQ9BVA1 445 aa20.5■□□□□ 0.87
VSX1-206ENST00000444511 SOHLH2Q9NX45 425 aa20.5■□□□□ 0.87
VSX1-206ENST00000444511 AMFRQ9UKV5 643 aa20.5■□□□□ 0.87
VSX1-206ENST00000444511 MKRN2OSH3BPM6 223 aa20.49■□□□□ 0.87
VSX1-206ENST00000444511 LDB2O43679 373 aa20.49■□□□□ 0.87
VSX1-206ENST00000444511 POLR2CP19387 275 aaPredicted RBP20.49■□□□□ 0.87
VSX1-206ENST00000444511 KPNA2P52292 529 aaKnown RBP20.49■□□□□ 0.87
VSX1-206ENST00000444511 GPR19Q15760 415 aa20.49■□□□□ 0.87
VSX1-206ENST00000444511 PARP6Q2NL67 630 aa20.49■□□□□ 0.87
VSX1-206ENST00000444511 ZRANB3Q5FWF4 1079 aa20.49■□□□□ 0.87
VSX1-206ENST00000444511 PEX26Q7Z412 305 aa20.49■□□□□ 0.87
VSX1-206ENST00000444511 TMEM126BQ8IUX1 230 aa20.49■□□□□ 0.87
VSX1-206ENST00000444511 UBL4BQ8N7F7 174 aa20.49■□□□□ 0.87
VSX1-206ENST00000444511 ACVR1CQ8NER5 493 aa20.49■□□□□ 0.87
VSX1-206ENST00000444511 OR4E2Q8NGC2 313 aa20.49■□□□□ 0.87
VSX1-206ENST00000444511 OR8K5Q8NH50 307 aa20.49■□□□□ 0.87
VSX1-206ENST00000444511 DNAJC1Q96KC8 554 aaKnown RBP20.49■□□□□ 0.87
VSX1-206ENST00000444511 ACTL8Q9H568 366 aa20.49■□□□□ 0.87
VSX1-206ENST00000444511 VPS37BQ9H9H4 285 aa20.49■□□□□ 0.87
VSX1-206ENST00000444511 ZDHHC3Q9NYG2 299 aa20.49■□□□□ 0.87
VSX1-206ENST00000444511 C17orf113A0A1B0GUU1 675 aa20.48■□□□□ 0.87
VSX1-206ENST00000444511 IFRD1O00458 451 aaPredicted RBP20.48■□□□□ 0.87
VSX1-206ENST00000444511 CPNE3O75131 537 aaKnown RBP20.48■□□□□ 0.87
VSX1-206ENST00000444511 SCRG1O75711 98 aa20.48■□□□□ 0.87
VSX1-206ENST00000444511 RECKO95980 971 aa20.48■□□□□ 0.87
VSX1-206ENST00000444511 ZNF449Q6P9G9 518 aa20.48■□□□□ 0.87
VSX1-206ENST00000444511 FAM199XQ6PEV8 388 aaPredicted RBP20.48■□□□□ 0.87
VSX1-206ENST00000444511 TMEM135Q86UB9 458 aa20.48■□□□□ 0.87
VSX1-206ENST00000444511 KLHDC8BQ8IXV7 354 aa20.48■□□□□ 0.87
VSX1-206ENST00000444511 FAM71DQ8N9W8 422 aa20.48■□□□□ 0.87
VSX1-206ENST00000444511 LCN9Q8WX39 176 aa20.48■□□□□ 0.87
VSX1-206ENST00000444511 FERD3LQ96RJ6 166 aa20.48■□□□□ 0.87
VSX1-206ENST00000444511 SRMSQ9H3Y6 488 aa20.48■□□□□ 0.87
VSX1-206ENST00000444511 LRRC40Q9H9A6 602 aa20.48■□□□□ 0.87
VSX1-206ENST00000444511 COG4Q9H9E3 785 aa20.48■□□□□ 0.87
VSX1-206ENST00000444511 KCND1Q9NSA2 647 aa20.48■□□□□ 0.87
VSX1-206ENST00000444511 TP53TG5Q9Y2B4 290 aa20.48■□□□□ 0.87
VSX1-206ENST00000444511 MAN2B2Q9Y2E5 1009 aa20.48■□□□□ 0.87
VSX1-206ENST00000444511 MATN2O00339 956 aa20.47■□□□□ 0.87
VSX1-206ENST00000444511 RFPL1O75677 317 aa20.47■□□□□ 0.87
VSX1-206ENST00000444511 TPH1P17752 444 aa20.47■□□□□ 0.87
VSX1-206ENST00000444511 CDH3P22223 829 aa20.47■□□□□ 0.87
VSX1-206ENST00000444511 ACRV1P26436 265 aa20.47■□□□□ 0.87
VSX1-206ENST00000444511 CDKN1CP49918 316 aaPredicted RBP20.47■□□□□ 0.87
VSX1-206ENST00000444511 RPS15P62841 145 aaKnown RBP20.47■□□□□ 0.87
VSX1-206ENST00000444511 FBXO38Q6PIJ6 1188 aa20.47■□□□□ 0.87
VSX1-206ENST00000444511 TAS2R42Q7RTR8 314 aa20.47■□□□□ 0.87
VSX1-206ENST00000444511 SERPINA9Q86WD7 417 aa20.47■□□□□ 0.87
VSX1-206ENST00000444511 SYCE1Q8N0S2 351 aa20.47■□□□□ 0.87
VSX1-206ENST00000444511 SEC14L1Q92503 715 aa20.47■□□□□ 0.87
VSX1-206ENST00000444511 ZNF501Q96CX3 271 aaPredicted RBP20.47■□□□□ 0.87
VSX1-206ENST00000444511 PPM1MQ96MI6 270 aa20.47■□□□□ 0.87
VSX1-206ENST00000444511 GPR87Q9BY21 358 aa20.47■□□□□ 0.87
VSX1-206ENST00000444511 AKIRIN1Q9H9L7 192 aaPredicted RBP20.47■□□□□ 0.87
VSX1-206ENST00000444511 FANCEQ9HB96 536 aa20.47■□□□□ 0.87
VSX1-206ENST00000444511 NLE1Q9NVX2 485 aaPredicted RBP20.47■□□□□ 0.87
VSX1-206ENST00000444511 POMT2Q9UKY4 750 aa20.47■□□□□ 0.87
VSX1-206ENST00000444511 BTRCQ9Y297 605 aa20.47■□□□□ 0.87
VSX1-206ENST00000444511 IGLV3-16A0A075B6K0 115 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 GSAPA4D1B5 854 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 SLC9B1P1A6NJY1 282 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 MIF4GDA9UHW6 222 aaKnown RBP20.46■□□□□ 0.87
VSX1-206ENST00000444511 METTL18O95568 372 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 PTPN4P29074 926 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 PMS2P54278 862 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 POU6F1Q14863 301 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 P3H1Q32P28 736 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 KCTD11Q693B1 232 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 TXLNBQ8N3L3 684 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 MR1Q95460 341 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 ALS2CR12Q96Q35 445 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 RUFY1Q96T51 708 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 BAG1Q99933 345 aaPredicted RBP20.46■□□□□ 0.87
VSX1-206ENST00000444511 TLR10Q9BXR5 811 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 RBSNQ9H1K0 784 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 OR52A5Q9H2C5 316 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 C1GALT1Q9NS00 363 aa20.46■□□□□ 0.87
VSX1-206ENST00000444511 PACSIN2Q9UNF0 486 aaPredicted RBP20.46■□□□□ 0.87
VSX1-206ENST00000444511 TRBV5-4A0A0C4DH59 114 aa20.45■□□□□ 0.86
VSX1-206ENST00000444511 H7C0S8 307 aa20.45■□□□□ 0.86
VSX1-206ENST00000444511 NR1D1P20393 614 aa20.45■□□□□ 0.86
VSX1-206ENST00000444511 RPS18P62269 152 aaKnown RBP20.45■□□□□ 0.86
VSX1-206ENST00000444511 CACNG1Q06432 222 aa20.45■□□□□ 0.86
VSX1-206ENST00000444511 KIF5AQ12840 1032 aa20.45■□□□□ 0.86
VSX1-206ENST00000444511 KLRB1Q12918 225 aa20.45■□□□□ 0.86
VSX1-206ENST00000444511 TCTN3Q6NUS6 607 aa20.45■□□□□ 0.86
VSX1-206ENST00000444511 LATS2Q9NRM7 1088 aa20.45■□□□□ 0.86
VSX1-206ENST00000444511 DDX3YO15523 660 aaKnown RBP20.44■□□□□ 0.86
VSX1-206ENST00000444511 PSMD3O43242 534 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 MAP3K7O43318 606 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 FTCDO95954 541 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 KLK3P07288 261 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms