RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TMEM115Q12893 351 aaPredicted RBP11.86□□□□□ -0.51
USF1-203ENST00000368021 GBX1Q14549 363 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 TAF11Q15544 211 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 TSNQ15631 228 aaKnown RBP11.86□□□□□ -0.51
USF1-203ENST00000368021 KHDC1Q4VXA5 237 aaKnown RBP11.86□□□□□ -0.51
USF1-203ENST00000368021 RAET1GQ6H3X3 334 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 KIAA1161Q6NSJ0 714 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 C10orf82Q8WW14 230 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 L3HYPDHQ96EM0 354 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 SIPA1Q96FS4 1042 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 CNDP1Q96KN2 507 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 PRRX2Q99811 253 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 NPHS2Q9NP85 383 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 PDP2Q9P2J9 529 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 HAO1Q9UJM8 370 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 RNF112Q9ULX5 631 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 DNAH14Q0VDD8 3507 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 SDK1Q7Z5N4 2213 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 NEMP2A6NFY4 417 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 IGLON5A6NGN9 336 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 K7ESM1 405 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 CDC7O00311 574 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 KLK8O60259 260 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 MTX2O75431 263 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 HSPA4LO95757 839 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 SP9P0CG40 484 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 ITGB6P18564 788 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 IMPDH1P20839 514 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 ATP6V1C1P21283 382 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 CCR7P32248 378 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 PRLHRP49683 370 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 NUBP1P53384 320 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 NAA20P61599 178 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 HERVK_113P63132 956 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 GALNT1Q10472 559 aaPredicted RBP11.85□□□□□ -0.51
USF1-203ENST00000368021 MAP7D1Q3KQU3 841 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 PLEKHS1Q5SXH7 462 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 NEK5Q6P3R8 708 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 TMEM92Q6UXU6 159 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 ADAMTSL4Q6UY14 1074 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 MYO1HQ8N1T3 1032 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 PELI3Q8N2H9 469 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 NAT14Q8WUY8 206 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 MRGPRX1Q96LB2 322 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 ZNF570Q96NI8 536 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 TMEM237Q96Q45 408 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 TRMOQ9BU70 441 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 ERVK-6Q9BXR3 956 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 ZNF395Q9H8N7 513 aaPredicted RBP11.85□□□□□ -0.51
USF1-203ENST00000368021 PREBQ9HCU5 417 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 SCOCQ9UIL1 159 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 IKZF3Q9UKT9 509 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 USH1CQ9Y6N9 552 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 R4GN57 208 aa11.85□□□□□ -0.51
USF1-203ENST00000368021 NPEPPSL1A6NEC2 478 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 CHURC1-FNTBB4DL54 471 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 UBXN8O00124 270 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 NUAK1O60285 661 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 LYPLA1O75608 230 aaPredicted RBP11.84□□□□□ -0.51
USF1-203ENST00000368021 HK2P52789 917 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 ADPRHP54922 357 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 BCL7AQ4VC05 210 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 TMEM259Q4ZIN3 620 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 ACSBG2Q5FVE4 666 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 CFAP157Q5JU67 520 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 ANO7Q6IWH7 933 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 PNCKQ6P2M8 343 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 ATG14Q6ZNE5 492 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 DET1Q7L5Y6 550 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 SYT13Q7L8C5 426 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 RAB44Q7Z6P3 723 aaPredicted RBP11.84□□□□□ -0.51
USF1-203ENST00000368021 WDR75Q8IWA0 830 aaKnown RBP11.84□□□□□ -0.51
USF1-203ENST00000368021 RASGEF1AQ8N9B8 481 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 GANCQ8TET4 914 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 PHF21BQ96EK2 531 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 ZNF514Q96K75 400 aaPredicted RBP11.84□□□□□ -0.51
USF1-203ENST00000368021 C1QTNF2Q9BXJ5 285 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 ILKAPQ9H0C8 392 aaPredicted RBP11.84□□□□□ -0.51
USF1-203ENST00000368021 KCNK13Q9HB14 408 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 TRIM39Q9HCM9 518 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 PRMT8Q9NR22 394 aaPredicted RBP11.84□□□□□ -0.51
USF1-203ENST00000368021 KCNK4Q9NYG8 393 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 MBD1Q9UIS9 605 aaPredicted RBP11.84□□□□□ -0.51
USF1-203ENST00000368021 NCKAP1Q9Y2A7 1128 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 DNAJC16Q9Y2G8 782 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 RAP2CQ9Y3L5 183 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 ZFHX2Q9C0A1 2572 aaPredicted RBP11.84□□□□□ -0.51
USF1-203ENST00000368021 NUMA1Q14980 2115 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 ANKRD12Q6UB98 2062 aa11.84□□□□□ -0.51
USF1-203ENST00000368021 STX16-NPEPL1H3BU86 382 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 K7ESF4 209 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 STX16O14662 325 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 INPP4BO15327 924 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 VEGFDO43915 354 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 GSTM1P09488 218 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 ACADMP11310 421 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 GFAPP14136 432 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 RAB15P59190 212 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 GSTM4Q03013 218 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 PRKAA1Q13131 559 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms