RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 C10orf107Q8IVU9 208 aa14.44□□□□□ -0.1
CXCL12-201ENST00000343575 PGBD3Q8N328 593 aa14.44□□□□□ -0.1
CXCL12-201ENST00000343575 SPEM1Q8N4L4 309 aa14.44□□□□□ -0.1
CXCL12-201ENST00000343575 OR2T34Q8NGX1 318 aa14.44□□□□□ -0.1
CXCL12-201ENST00000343575 RLN3Q8WXF3 142 aa14.44□□□□□ -0.1
CXCL12-201ENST00000343575 ASB12Q8WXK4 309 aa14.44□□□□□ -0.1
CXCL12-201ENST00000343575 HIC2Q96JB3 615 aa14.44□□□□□ -0.1
CXCL12-201ENST00000343575 MIPEPQ99797 713 aa14.44□□□□□ -0.1
CXCL12-201ENST00000343575 MRPL57Q9BQC6 102 aaKnown RBP14.44□□□□□ -0.1
CXCL12-201ENST00000343575 OR2AG1Q9H205 316 aa14.44□□□□□ -0.1
CXCL12-201ENST00000343575 TRIM39Q9HCM9 518 aa14.44□□□□□ -0.1
CXCL12-201ENST00000343575 NPHS2Q9NP85 383 aa14.44□□□□□ -0.1
CXCL12-201ENST00000343575 CYP8B1Q9UNU6 501 aa14.44□□□□□ -0.1
CXCL12-201ENST00000343575 CDYLQ9Y232 598 aa14.44□□□□□ -0.1
CXCL12-201ENST00000343575 OR1A2Q9Y585 309 aa14.44□□□□□ -0.1
CXCL12-201ENST00000343575 TECTAO75443 2155 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 BIRC5O15392 142 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 LATO43561 262 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 PI15O43692 258 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 DLX3O60479 287 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 CDK14O94921 469 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 FUCA1P04066 466 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 OR56A5P0C7T3 313 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 FGF3P11487 239 aaPredicted RBP14.43□□□□□ -0.1
CXCL12-201ENST00000343575 BGNP21810 368 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 TEAD1P28347 426 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 PXNP49023 591 aaPredicted RBP14.43□□□□□ -0.1
CXCL12-201ENST00000343575 PRLHRP49683 370 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 SGCGQ13326 291 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 TBCCQ15814 346 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 UGT3A1Q6NUS8 523 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 TMEM220Q6QAJ8 160 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 TRIM42Q8IWZ5 723 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 FAM160A2Q8N612 972 aaPredicted RBP14.43□□□□□ -0.1
CXCL12-201ENST00000343575 ZBTB2Q8N680 514 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 LINGO1Q96FE5 620 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 PDLIM5Q96HC4 596 aaKnown RBP14.43□□□□□ -0.1
CXCL12-201ENST00000343575 SCYL1Q96KG9 808 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 FAM210AQ96ND0 272 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 TPSD1Q9BZJ3 242 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 MRPL46Q9H2W6 279 aaKnown RBP14.43□□□□□ -0.1
CXCL12-201ENST00000343575 C6orf106Q9H6K1 298 aaPredicted RBP14.43□□□□□ -0.1
CXCL12-201ENST00000343575 ALG9Q9H6U8 611 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 MANSC1Q9H8J5 431 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 SGK2Q9HBY8 427 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 WSB2Q9NYS7 404 aaPredicted RBP14.43□□□□□ -0.1
CXCL12-201ENST00000343575 TMEM98Q9Y2Y6 226 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 SIT1Q9Y3P8 196 aa14.43□□□□□ -0.1
CXCL12-201ENST00000343575 NEMP2A6NFY4 417 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 CFAP99D6REC4 459 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 CDC7O00311 574 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 STK25O00506 426 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 SEMA4FO95754 770 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 ESRRAP11474 423 aaPredicted RBP14.42□□□□□ -0.1
CXCL12-201ENST00000343575 MTHFD2P13995 350 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 ZNF8P17098 575 aaPredicted RBP14.42□□□□□ -0.1
CXCL12-201ENST00000343575 ARRB2P32121 409 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 IL2P60568 153 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 SFSWAPQ12872 951 aaKnown RBP14.42□□□□□ -0.1
CXCL12-201ENST00000343575 ZYG11AQ6WRX3 759 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 ZCCHC23Q6ZST2 131 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 PIWIL4Q7Z3Z4 852 aaKnown RBP14.42□□□□□ -0.1
CXCL12-201ENST00000343575 C11orf96Q7Z7L8 435 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 VRK3Q8IV63 474 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 NKAPQ8N5F7 415 aaKnown RBP14.42□□□□□ -0.1
CXCL12-201ENST00000343575 LILRA3Q8N6C8 439 aaPredicted RBP14.42□□□□□ -0.1
CXCL12-201ENST00000343575 DRAXINQ8NBI3 349 aaPredicted RBP14.42□□□□□ -0.1
CXCL12-201ENST00000343575 KIAA1191Q96A73 305 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 SKA1Q96BD8 255 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 MOCOSQ96EN8 888 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 TOE1Q96GM8 510 aaKnown RBP14.42□□□□□ -0.1
CXCL12-201ENST00000343575 PANX3Q96QZ0 392 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 ATOH8Q96SQ7 321 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 MYOCQ99972 504 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 TSSK1BQ9BXA7 367 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 C20orf27Q9GZN8 174 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 EPHX3Q9H6B9 360 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 HEY2Q9UBP5 337 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 NCOR1O75376 2440 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 CACNA1IQ9P0X4 2223 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 POM121BA6NF01 834 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 KLF11O14901 512 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 IGHV4-34P06331 123 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 RALBP11234 206 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 TSNQ15631 228 aaKnown RBP14.42□□□□□ -0.1
CXCL12-201ENST00000343575 TRMT5Q32P41 509 aaKnown RBP14.42□□□□□ -0.1
CXCL12-201ENST00000343575 NET1Q7Z628 596 aaPredicted RBP14.42□□□□□ -0.1
CXCL12-201ENST00000343575 NUDCD3Q8IVD9 361 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 NCSTNQ92542 709 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 DLG3Q92796 817 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 TFB2MQ9H5Q4 396 aaKnown RBP14.42□□□□□ -0.1
CXCL12-201ENST00000343575 ZNF395Q9H8N7 513 aaPredicted RBP14.42□□□□□ -0.1
CXCL12-201ENST00000343575 OXSMQ9NWU1 459 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 KLHL42Q9P2K6 505 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 CA5BQ9Y2D0 317 aa14.42□□□□□ -0.1
CXCL12-201ENST00000343575 ANKRD12Q6UB98 2062 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 IGHV1OR15-9A0A0B4J2B8 117 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 NPEPPSL1A6NEC2 478 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 LRRC72A6NJI9 287 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 K7ESF4 209 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms