RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 TEX13DA0A0J9YY54 714 aaPredicted RBP16.2■□□□□ 0.18
PTCH1-201ENST00000331920 NT5C1B-RDH14C9J2C7 533 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 IFNA7P01567 189 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 BPIFB1Q8TDL5 484 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 THEM6Q8WUY1 208 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 TBCBQ99426 244 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 BARD1Q99728 777 aaKnown RBP16.2■□□□□ 0.18
PTCH1-201ENST00000331920 CDT1Q9H211 546 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 CLEC3AO75596 197 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 IFNW1P05000 195 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 FMO3P31513 532 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 CLEC6AQ6EIG7 209 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 NOXRED1Q6NXP6 359 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 SLC9A9Q8IVB4 645 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 TMEM203Q969S6 136 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 C12orf43Q96C57 262 aaKnown RBP16.2■□□□□ 0.18
PTCH1-201ENST00000331920 CERS4Q9HA82 394 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 ELOVL7A1L3X0 281 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 NKRFO15226 690 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTCH1-201ENST00000331920 STBD1O95210 358 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 CFL1P23528 166 aaKnown RBP16.19■□□□□ 0.18
PTCH1-201ENST00000331920 ECT2LQ008S8 904 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 PGM5Q15124 567 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 TMEM199Q8N511 208 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 PPP1R14DQ9NXH3 145 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 EFCAB9A8MZ26 197 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 CXCL14O95715 111 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 SLC2A2P11168 524 aaPredicted RBP16.19■□□□□ 0.18
PTCH1-201ENST00000331920 GBX2P52951 348 aaPredicted RBP16.19■□□□□ 0.18
PTCH1-201ENST00000331920 HYAL2Q12891 473 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 MLIPQ5VWP3 458 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 OTUB2Q96DC9 234 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 ADAD1Q96M93 576 aaKnown RBP16.19■□□□□ 0.18
PTCH1-201ENST00000331920 MYO18AQ92614 2054 aaKnown RBP16.19■□□□□ 0.18
PTCH1-201ENST00000331920 OR6C6A6NF89 314 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 SHOX2O60902 331 aaPredicted RBP16.19■□□□□ 0.18
PTCH1-201ENST00000331920 TRMUO75648 421 aaKnown RBP16.19■□□□□ 0.18
PTCH1-201ENST00000331920 UNC5CO95185 931 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 APODP05090 189 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 DPEP1P16444 411 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 PRAMEF19Q5SWL8 479 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 HBEGFQ99075 208 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 COPS8Q99627 209 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 TUBG2Q9NRH3 451 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 HK1P19367 917 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 DCKP27707 260 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 SH3D19Q5HYK7 790 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 P2RY8Q86VZ1 359 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 SNX29P2Q8IUI4 249 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 BEND7Q8N7W2 519 aaPredicted RBP16.19■□□□□ 0.18
PTCH1-201ENST00000331920 NPLOC4Q8TAT6 608 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 KLHL6Q8WZ60 621 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 FAM149AA5PLN7 773 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 NUDT17P0C025 328 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 OGNP20774 298 aaKnown RBP16.19■□□□□ 0.18
PTCH1-201ENST00000331920 CTHP32929 405 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 SLC38A4Q969I6 547 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 PDLIM2Q96JY6 352 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 OR10A4Q9H209 315 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 HES2Q9Y543 173 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 WFS1O76024 890 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 WSCD2Q2TBF2 565 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 MYO19Q96H55 970 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 CRAMP1Q96RY5 1269 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 PFDN5Q99471 154 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 ARHGAP9Q9BRR9 750 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 ASPNQ9BXN1 380 aa16.19■□□□□ 0.18
PTCH1-201ENST00000331920 SSX4O60224 188 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 MYCLP1P12525 358 aaPredicted RBP16.18■□□□□ 0.18
PTCH1-201ENST00000331920 HERV-K104P61576 105 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 C9orf131Q5VYM1 1079 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 NYAP1Q6ZVC0 841 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 SPATA19Q7Z5L4 167 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 TAMM41Q96BW9 452 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 SREBF1P36956 1147 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 ELP6Q0PNE2 266 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 BST1Q10588 318 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 RBM48Q5RL73 367 aaKnown RBP16.18■□□□□ 0.18
PTCH1-201ENST00000331920 SYCE2Q6PIF2 218 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 DPY19L4Q7Z388 723 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 YIPF7Q8N8F6 280 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 NSMCE3Q96MG7 304 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 OVOS2A0A0G2JMS6 1433 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 OVOS2A0A0J9YW53 1432 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 OVOS2Q6IE36 1432 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 ZMYM2Q9UBW7 1377 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 TEX13CA0A0J9YWL9 993 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 MPSTP25325 297 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 INTS6LQ5JSJ4 861 aaKnown RBP16.18■□□□□ 0.18
PTCH1-201ENST00000331920 KLK6Q92876 244 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 NECAB3Q96P71 396 aaPredicted RBP16.18■□□□□ 0.18
PTCH1-201ENST00000331920 TM9SF3Q9HD45 589 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 A8MU76 341 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 HOXB8P17481 243 aaPredicted RBP16.18■□□□□ 0.18
PTCH1-201ENST00000331920 ATXN7L3Q14CW9 347 aaPredicted RBP16.18■□□□□ 0.18
PTCH1-201ENST00000331920 RNASEH2BQ5TBB1 312 aaKnown RBP16.18■□□□□ 0.18
PTCH1-201ENST00000331920 GALNT15Q8N3T1 639 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 C14orf105Q9NVL8 296 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 ADAM28Q9UKQ2 775 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 KIR3DL1P43629 444 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms