RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 PHKG1Q16816 387 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 TMEM266Q2M3C6 531 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 TBRG1Q3YBR2 411 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 SUPT20HL1Q3ZLR7 823 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 C5orf22Q49AR2 442 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 KCNT1Q5JUK3 1230 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 TCHHL1Q5QJ38 904 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 SLX4IPQ5VYV7 408 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 ATL3Q6DD88 541 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 FAM180BQ6P0A1 224 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 KLHL35Q6PF15 583 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 DHRS4L2Q6PKH6 230 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 LRIG3Q6UXM1 1119 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 PIK3AP1Q6ZUJ8 805 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 BHLHA9Q7RTU4 235 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 HDDC2Q7Z4H3 204 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 TBC1D1Q86TI0 1168 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 TRABD2AQ86V40 505 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 CAMK1DQ8IU85 385 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 MB21D2Q8IYB1 491 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 TBC1D21Q8IYX1 336 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 NATD1Q8N6N6 113 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 GRPEL2Q8TAA5 225 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 MPLKIPQ8TAP9 179 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 DDI1Q8WTU0 396 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 MRPS27Q92552 414 aaKnown RBP4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 RAPGEF5Q92565 580 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 BORCS5Q969J3 196 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 KAZALD1Q96I82 304 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZNF333Q96JL9 665 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 TTC25Q96NG3 672 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 VPS35Q96QK1 796 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 BBS4Q96RK4 519 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 NUDCD1Q96RS6 583 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 HTATIP2Q9BUP3 242 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 C9orf16Q9BUW7 83 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 MXD3Q9BW11 206 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 CCDC106Q9BWC9 280 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 QTRT1Q9BXR0 403 aaKnown RBP4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 CALN1Q9BXU9 219 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 NYXQ9GZU5 481 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 USP44Q9H0E7 712 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 TP63Q9H3D4 680 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 DCLRE1BQ9H816 532 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 TUFT1Q9NNX1 390 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 TXLNGQ9NUQ3 528 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 PLK2Q9NYY3 685 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 SENP1Q9P0U3 644 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 TBC1D14Q9P2M4 693 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 KLHL13Q9P2N7 655 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 UBA2Q9UBT2 640 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 NARFQ9UHQ1 456 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 PCDHA12Q9UN75 941 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 WDR19Q8NEZ3 1342 aa4.64□□□□□ -1.67
HMGB3P13-201ENST00000511263 PHLPP1O60346 1717 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 CCDC187A0A096LP49 1063 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 A0A0G2JPF8 293 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 GXYLT2A0PJZ3 443 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 TSPY2A6NKD2 308 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 HNRNPCL3B7ZW38 293 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 SGK1O00141 431 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 FCHO1O14526 889 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 SLC9A3R1O14745 358 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 POLR1CO15160 346 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 NDUFA2O43678 99 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 TLR2O60603 784 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 NIPSNAP2O75323 286 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 SERPINI2O75830 405 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 CCNDBP1O95273 360 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 GUCA1CO95843 209 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 PLAUP00749 431 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ALDOAP04075 364 aaKnown RBP4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 PCCAP05165 728 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 S100A9P06702 114 aaKnown RBP4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 FAM228BP0C875 321 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 TSPY3P0CV98 308 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 TSPY8P0CW00 308 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 HNRNPCL4P0DMR1 293 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 MYBL1P10243 752 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 P4HA1P13674 534 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 STMN1P16949 149 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 RPS6KB1P23443 525 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 NDUFS1P28331 727 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 RFC4P35249 363 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ATP5OP48047 213 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 CPA2P48052 419 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 SLC9A3P48764 834 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 STARP49675 285 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 TUBP50607 506 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 NUP107P57740 925 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 HAND2P61296 217 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 NAA20P61599 178 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 CSNK2BP67870 215 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 COG7P83436 770 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 TSPY1Q01534 308 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ACY1Q03154 408 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 TLE3Q04726 772 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 GFPT1Q06210 699 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZNF33BQ06732 778 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ENPEPQ07075 957 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms