RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 MAP1BP46821 2468 aaKnown RBP13.07□□□□□ -0.32
BRAT1-205ENST00000473879 USP24Q9UPU5 2620 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 IGLV3-16A0A075B6K0 115 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 A0A087X1B8 175 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 NEMP2A6NFY4 417 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 FADS2P1A8MWK0 482 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 E5RI56 91 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 TRIM38O00635 465 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 COPEO14579 308 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 SCAMP1O15126 338 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 PRPF4O43172 522 aaKnown RBP eCLIP13.06□□□□□ -0.323e-6■■■■□ 19.9
BRAT1-205ENST00000473879 GLRA3O75311 464 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 VPS26AO75436 327 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 HOXC4P09017 264 aaPredicted RBP13.06□□□□□ -0.32
BRAT1-205ENST00000473879 GIMD1P0DJR0 217 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 ALPPL2P10696 532 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 CDK4P11802 303 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 CKMT2P17540 419 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 MSH3P20585 1137 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 SAT1P21673 171 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 CD9P21926 228 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 FMO4P31512 558 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 SLC18A2Q05940 514 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 INPP5AQ14642 412 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 ZKSCAN8Q15776 578 aaPredicted RBP13.06□□□□□ -0.32
BRAT1-205ENST00000473879 PROX2Q3B8N5 592 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 ZNF542PQ5EBM4 170 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 PTRHD1Q6GMV3 140 aaKnown RBP13.06□□□□□ -0.32
BRAT1-205ENST00000473879 UGT3A1Q6NUS8 523 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 ADAMTSL4Q6UY14 1074 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 TMPRSS7Q7RTY8 843 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 LCA5Q86VQ0 697 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 PELI3Q8N2H9 469 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 KCNJ9Q92806 393 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 APOOQ9BUR5 198 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 TSSK1BQ9BXA7 367 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 TMEM121BQ9BXQ6 578 aaPredicted RBP13.06□□□□□ -0.32
BRAT1-205ENST00000473879 P2RY12Q9H244 342 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 CAB39LQ9H9S4 337 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 KCNK9Q9NPC2 374 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 NKIRAS1Q9NYS0 192 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 TAS2R13Q9NYV9 303 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 NLGN3Q9NZ94 848 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 KLF15Q9UIH9 416 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 PNMA8BQ9ULN7 279 aaPredicted RBP13.06□□□□□ -0.32
BRAT1-205ENST00000473879 CSNK1G3Q9Y6M4 447 aa13.06□□□□□ -0.32
BRAT1-205ENST00000473879 PTPRBP23467 1997 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 A0A096LPK6 155 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 FOXO6A8MYZ6 492 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 GOLGA8RI6L899 631 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 SIGLEC6O43699 453 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 OR1I1O60431 355 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 AP2A2O94973 939 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 ZWINTO95229 277 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 SLC25A14O95258 325 aaPredicted RBP13.05□□□□□ -0.32
BRAT1-205ENST00000473879 PCCBP05166 539 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 GSTA1P08263 222 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 OR56A5P0C7T3 313 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 JUNDP17535 347 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 FDXRP22570 491 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 ACP1P24666 158 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 CCT5P48643 541 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 ACADVLP49748 655 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 KPNA2P52292 529 aaKnown RBP13.05□□□□□ -0.32
BRAT1-205ENST00000473879 SLC18A1P54219 525 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 TAS2R39P59534 338 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 ILKQ13418 452 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 PDAP1Q13442 181 aaKnown RBP13.05□□□□□ -0.32
BRAT1-205ENST00000473879 NFATC4Q14934 902 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 SEPT7Q16181 437 aaKnown RBP13.05□□□□□ -0.32
BRAT1-205ENST00000473879 ZNF549Q6P9A3 640 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 CMC1Q7Z7K0 106 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 GALNT15Q8N3T1 639 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 BANPQ8N9N5 519 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 ZNF548Q8NEK5 533 aaPredicted RBP13.05□□□□□ -0.32
BRAT1-205ENST00000473879 GATA6Q92908 595 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 FUBP1Q96AE4 644 aaKnown RBP13.05□□□□□ -0.32
BRAT1-205ENST00000473879 BIRC8Q96P09 236 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 PANX3Q96QZ0 392 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 DUSP23Q9BVJ7 150 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 VPS11Q9H270 941 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 CAAP1Q9H8G2 361 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.05□□□□□ -0.32
BRAT1-205ENST00000473879 SPASTQ9UBP0 616 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 DCDC2Q9UHG0 476 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 CFAP47Q6ZTR5 3102 aa13.05□□□□□ -0.32
BRAT1-205ENST00000473879 TDRD6O60522 2096 aaKnown RBP13.04□□□□□ -0.32
BRAT1-205ENST00000473879 CACNA1BQ00975 2339 aa13.04□□□□□ -0.32
BRAT1-205ENST00000473879 TMEM120BA0PK00 339 aa13.04□□□□□ -0.32
BRAT1-205ENST00000473879 TM9SF1O15321 606 aa13.04□□□□□ -0.32
BRAT1-205ENST00000473879 FFAR2O15552 330 aa13.04□□□□□ -0.32
BRAT1-205ENST00000473879 AQP9O43315 295 aa13.04□□□□□ -0.32
BRAT1-205ENST00000473879 SPAG7O75391 227 aa13.04□□□□□ -0.32
BRAT1-205ENST00000473879 RFPL3O75679 317 aa13.04□□□□□ -0.32
BRAT1-205ENST00000473879 C2P06681 752 aa13.04□□□□□ -0.32
BRAT1-205ENST00000473879 COL6A2P12110 1019 aa13.04□□□□□ -0.32
BRAT1-205ENST00000473879 ATP1B2P14415 290 aaPredicted RBP13.04□□□□□ -0.32
BRAT1-205ENST00000473879 HTR1BP28222 390 aa13.04□□□□□ -0.32
BRAT1-205ENST00000473879 CA5AP35218 305 aa13.04□□□□□ -0.32
BRAT1-205ENST00000473879 SLC26A3P40879 764 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms