RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TTPAP49638 278 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 GSTM4Q03013 218 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 SQSTM1Q13501 440 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 TRA2AQ13595 282 aaKnown RBP eCLIP12.62□□□□□ -0.39
COL5A1-206ENST00000465877 PLCL1Q15111 1095 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 ARMC3Q5W041 872 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 KIAA0930Q6ICG6 404 aaPredicted RBP12.62□□□□□ -0.39
COL5A1-206ENST00000465877 CASC4Q6P4E1 433 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 TMEM71Q6P5X7 295 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 WDR74Q6RFH5 385 aaPredicted RBP12.62□□□□□ -0.39
COL5A1-206ENST00000465877 CES3Q6UWW8 571 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 CERS6Q6ZMG9 384 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 KLHL7Q8IXQ5 586 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 CFAP206Q8IYR0 622 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 FBXO39Q8N4B4 442 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 OTUD6BQ8N6M0 293 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 SPDYE1Q8NFV5 336 aaPredicted RBP12.62□□□□□ -0.39
COL5A1-206ENST00000465877 RSC1A1Q92681 617 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 ZNF669Q96BR6 464 aaPredicted RBP12.62□□□□□ -0.39
COL5A1-206ENST00000465877 C12orf66Q96MD2 445 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 ZNF578Q96N58 590 aaPredicted RBP12.62□□□□□ -0.39
COL5A1-206ENST00000465877 TTC1Q99614 292 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 TRIM56Q9BRZ2 755 aaKnown RBP12.62□□□□□ -0.39
COL5A1-206ENST00000465877 CCM2Q9BSQ5 444 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 THSD1Q9NS62 852 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 OGFRQ9NZT2 677 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 SAMD15Q9P1V8 674 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 RNF14Q9UBS8 474 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 ANAPC5Q9UJX4 755 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 CDRT15L2A8MXV6 281 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 CD3EAPO15446 510 aaKnown RBP12.61□□□□□ -0.39
COL5A1-206ENST00000465877 TNFSF15O95150 251 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 POLBP06746 335 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 OR56A5P0C7T3 313 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 ITIH1P19827 911 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 MPSTP25325 297 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 RBMS1P29558 406 aaKnown RBP12.61□□□□□ -0.39
COL5A1-206ENST00000465877 PPARGP37231 505 aaPredicted RBP12.61□□□□□ -0.39
COL5A1-206ENST00000465877 PREPP48147 710 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 GFERP55789 205 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 PCBP4P57723 403 aaKnown RBP12.61□□□□□ -0.39
COL5A1-206ENST00000465877 ERVPABLB-1P60509 514 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 ETF1P62495 437 aaKnown RBP12.61□□□□□ -0.39
COL5A1-206ENST00000465877 DR1Q01658 176 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 BOP1Q14137 746 aaKnown RBP12.61□□□□□ -0.39
COL5A1-206ENST00000465877 SYTL3Q4VX76 610 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 SYT10Q6XYQ8 523 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 SYDE1Q6ZW31 735 aaPredicted RBP12.61□□□□□ -0.39
COL5A1-206ENST00000465877 LDB1Q86U70 411 aaPredicted RBP12.61□□□□□ -0.39
COL5A1-206ENST00000465877 HOOK3Q86VS8 718 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 JAMLQ86YT9 394 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 NCSTNQ92542 709 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 ELMO1Q92556 727 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 TMEM159Q96B96 161 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 DCBLD2Q96PD2 775 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 INSM2Q96T92 566 aaPredicted RBP12.61□□□□□ -0.39
COL5A1-206ENST00000465877 CMKLR1Q99788 373 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 TRIM51Q9BSJ1 452 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 OR52A5Q9H2C5 316 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 PISDQ9UG56 409 aa12.61□□□□□ -0.39
COL5A1-206ENST00000465877 SNRNP200O75643 2136 aaKnown RBP12.61□□□□□ -0.39
COL5A1-206ENST00000465877 FAM237BA0A1B0GVD1 139 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 GOLGA8KD6RF30 607 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 GOLGA8TH3BQL2 631 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 LIN7AO14910 233 aaPredicted RBP12.6□□□□□ -0.39
COL5A1-206ENST00000465877 TTI1O43156 1089 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 VAPBO95292 243 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 TYRP1P17643 537 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 PAMP19021 973 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 CASQ1P31415 396 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 ETV5P41161 510 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 RPA4Q13156 261 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 DHX34Q14147 1143 aaKnown RBP12.6□□□□□ -0.39
COL5A1-206ENST00000465877 TYSND1Q2T9J0 566 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 SNAP47Q5SQN1 464 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 IZUMO3Q5VZ72 239 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 CAPRIN2Q6IMN6 1127 aaKnown RBP12.6□□□□□ -0.39
COL5A1-206ENST00000465877 CLEC14AQ86T13 490 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 PDZD3Q86UT5 571 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 AGGF1Q8N302 714 aaeCLIP12.6□□□□□ -0.39
COL5A1-206ENST00000465877 LKAAEAR1Q8TD35 194 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 JPH3Q8WXH2 748 aaPredicted RBP12.6□□□□□ -0.39
COL5A1-206ENST00000465877 SLC46A1Q96NT5 459 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 IL1RAPL1Q9NZN1 696 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 AKAP7Q9P0M2 348 aaPredicted RBP12.6□□□□□ -0.39
COL5A1-206ENST00000465877 PDP2Q9P2J9 529 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 KLHL3Q9UH77 587 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 HEBP2Q9Y5Z4 205 aa12.6□□□□□ -0.39
COL5A1-206ENST00000465877 UBA6A0AVT1 1052 aaPredicted RBP12.59□□□□□ -0.39
COL5A1-206ENST00000465877 SDR42E2A6NKP2 422 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 F8W8V4 182 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 IFRD1O00458 451 aaPredicted RBP12.59□□□□□ -0.39
COL5A1-206ENST00000465877 PRMT5O14744 637 aaPredicted RBP12.59□□□□□ -0.39
COL5A1-206ENST00000465877 USP1O94782 785 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 C9P02748 559 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 AMD1P17707 334 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 ITGB6P18564 788 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 OGNP20774 298 aaKnown RBP12.59□□□□□ -0.39
COL5A1-206ENST00000465877 IVDP26440 423 aa12.59□□□□□ -0.39
COL5A1-206ENST00000465877 PDHA2P29803 388 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms