RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 RHPN2P1A8MT19 583 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 A8MT66 165 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 FAM220BPB1ANY3 271 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 HS6ST1O60243 411 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 DLX3O60479 287 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 EFNA1P20827 205 aaPredicted RBP12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 ALAS2P22557 587 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 CMPK1P30085 196 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 BLKP51451 505 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 ERVFC1P60507 584 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 TJAP1Q5JTD0 557 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 IRAK1BP1Q5VVH5 260 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 TRNP1Q6NT89 227 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 CPSF7Q8N684 471 aaKnown RBP12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 SHDQ96IW2 340 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 ZNF641Q96N77 438 aaPredicted RBP12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 EBF4Q9BQW3 602 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 EBPLQ9BY08 206 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 AP4S1Q9Y587 144 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 OR1I1O60431 355 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 CFIP05156 583 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 CTGFP29279 349 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 DHPSP49366 369 aaPredicted RBP12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 C9orf64Q5T6V5 341 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 ZFP1Q6P2D0 407 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 C16orf62Q7Z3J2 963 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 YTHDF3Q7Z739 585 aaKnown RBP12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 ZDHHC13Q8IUH4 622 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 PHC3Q8NDX5 983 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 PHOSPHO2Q8TCD6 241 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 INTS7Q9NVH2 962 aaKnown RBP12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 USP3Q9Y6I4 520 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 A0A0G2JN53 185 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 H3BN98 237 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 CCR3P51677 355 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 PKDCCQ504Y2 493 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 GPAT3Q53EU6 434 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 METTL21CQ5VZV1 264 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 NXPE1Q8N323 547 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 ZNF276Q8N554 614 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 ZCCHC10Q8TBK6 192 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 VMP1Q96GC9 406 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 ITCHQ96J02 903 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 TDRD1Q9BXT4 1180 aaKnown RBP12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 MARCH5Q9NX47 278 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 MAFFQ9ULX9 164 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 PCDHGA11Q9Y5H2 935 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 ZNF780BQ9Y6R6 833 aa12.91□□□□□ -0.34
PTPRN2-202ENST00000389416 SHANK3Q9BYB0 1731 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 TRIM38O00635 465 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 CCNDBP1O95273 360 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 PAPSS2O95340 614 aaPredicted RBP12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 ZNF8P17098 575 aaPredicted RBP12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 AQP1P29972 269 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 IL5RAQ01344 420 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 ELAVL3Q14576 367 aaKnown RBP12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 ZNHIT3Q15649 155 aaPredicted RBP12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 ERN2Q76MJ5 926 aaKnown RBP12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 SPATA19Q7Z5L4 167 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 TMCO5AQ8N6Q1 288 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 TFGQ92734 400 aaPredicted RBP12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 TMEM79Q9BSE2 394 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 OXSMQ9NWU1 459 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 SCHIP1Q9P0W5 487 aaPredicted RBP12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 SUFUQ9UMX1 484 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 MRPS33Q9Y291 106 aaKnown RBP12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 SMCHD1A6NHR9 2005 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 ITM2AO43736 263 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 NPHS1O60500 1241 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 PSMG1O95456 288 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 PREPP48147 710 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 TMEM198Q66K66 360 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 BHLHB9Q6PI77 547 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 RPS27LQ71UM5 84 aaKnown RBP12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 ULK2Q8IYT8 1036 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 MICU2Q8IYU8 434 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 CDK20Q8IZL9 346 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 CAMKK1Q8N5S9 505 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 RBM15BQ8NDT2 890 aaKnown RBP12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 EXOSC8Q96B26 276 aaKnown RBP12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 CCDC28BQ9BUN5 200 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 ZDHHC7Q9NXF8 308 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 ECM29Q5VYK3 1845 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 POLR2JP52435 117 aaKnown RBP12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 NRF1Q16656 503 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 ISLR2Q6UXK2 745 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 ANKRD46Q86W74 232 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 GSTCDQ8NEC7 633 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 FIBINQ8TAL6 211 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 NACC2Q96BF6 587 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 PRICKLE1Q96MT3 831 aaPredicted RBP12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 CCM2Q9BSQ5 444 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 RERGLQ9H628 205 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 EQTNQ9NQ60 294 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 NLE1Q9NVX2 485 aaPredicted RBP12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 SIRPGQ9P1W8 387 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 VPS4AQ9UN37 437 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 SLC22A14Q9Y267 594 aa12.9□□□□□ -0.34
PTPRN2-202ENST00000389416 RFXAPO00287 272 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms