RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 FTCDO95954 541 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 GSTM1P09488 218 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 SLC35G4P0C7Q5 338 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 FAM87AP0C7U9 286 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 NDUFS1P28331 727 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 GSTM4Q03013 218 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 C6orf15Q6UXA7 325 aaPredicted RBP17.33■□□□□ 0.36
HDDC3-201ENST00000330334 FAM92BQ6ZTR7 304 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 LINC00523Q86TU6 105 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 CFAP206Q8IYR0 622 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 HM13Q8TCT9 377 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 STYXQ8WUJ0 223 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 C12orf66Q96MD2 445 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 DESI2Q9BSY9 194 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 TMEM121Q9BTD3 319 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 WWP1Q9H0M0 922 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 IMP3Q9NV31 184 aaKnown RBP17.33■□□□□ 0.36
HDDC3-201ENST00000330334 NLE1Q9NVX2 485 aaPredicted RBP17.33■□□□□ 0.36
HDDC3-201ENST00000330334 ZDHHC3Q9NYG2 299 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 R3HDM2Q9Y2K5 976 aaKnown RBP17.33■□□□□ 0.36
HDDC3-201ENST00000330334 HEBP2Q9Y5Z4 205 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 IGHV5-51A0A0C4DH38 117 aa17.32■□□□□ 0.36
HDDC3-201ENST00000330334 A0A0U1RQJ8 604 aa17.32■□□□□ 0.36
HDDC3-201ENST00000330334 ERI2A8K979 691 aaKnown RBP17.32■□□□□ 0.36
HDDC3-201ENST00000330334 PBLDP30039 288 aaPredicted RBP17.32■□□□□ 0.36
HDDC3-201ENST00000330334 MC4RP32245 332 aa17.32■□□□□ 0.36
HDDC3-201ENST00000330334 PLCL1Q15111 1095 aa17.32■□□□□ 0.36
HDDC3-201ENST00000330334 ZNF658BQ4V348 819 aaPredicted RBP17.32■□□□□ 0.36
HDDC3-201ENST00000330334 PPP1R3BQ86XI6 285 aa17.32■□□□□ 0.36
HDDC3-201ENST00000330334 CDKN2AIPNLQ96HQ2 116 aa17.32■□□□□ 0.36
HDDC3-201ENST00000330334 TSGA10Q9BZW7 698 aa17.32■□□□□ 0.36
HDDC3-201ENST00000330334 VPS37BQ9H9H4 285 aa17.32■□□□□ 0.36
HDDC3-201ENST00000330334 PDE7BQ9NP56 450 aa17.32■□□□□ 0.36
HDDC3-201ENST00000330334 HRASLS2Q9NWW9 162 aa17.32■□□□□ 0.36
HDDC3-201ENST00000330334 SLC24A2Q9UI40 661 aa17.32■□□□□ 0.36
HDDC3-201ENST00000330334 RPS6KL1Q9Y6S9 549 aa17.32■□□□□ 0.36
HDDC3-201ENST00000330334 ZNF106Q9H2Y7 1883 aaKnown RBP17.32■□□□□ 0.36
HDDC3-201ENST00000330334 TENM4Q6N022 2769 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 TCRBV7S2A1N4TA0A589 114 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 TLCD2A6NGC4 264 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 MROH6A6NGR9 719 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 NKX2-8O15522 239 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 SPAG6O75602 509 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 RECKO95980 971 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 MT-ND3P03897 115 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 ZNF28P17035 718 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 ACRV1P26436 265 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 CD151P48509 253 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 GDF10P55107 478 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 PPP1CAP62136 330 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 TMPRSS15P98073 1019 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 ACY1Q03154 408 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 NFATC3Q12968 1075 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 RPA4Q13156 261 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 OOSP2Q86WS3 158 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 RASGRP3Q8IV61 690 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 UNC5BQ8IZJ1 945 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 D2HGDHQ8N465 521 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 SIDT2Q8NBJ9 832 aaKnown RBP17.31■□□□□ 0.36
HDDC3-201ENST00000330334 SPDYE1Q8NFV5 336 aaPredicted RBP17.31■□□□□ 0.36
HDDC3-201ENST00000330334 DNAJC1Q96KC8 554 aaKnown RBP17.31■□□□□ 0.36
HDDC3-201ENST00000330334 SLC25A18Q9H1K4 315 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 IL17BQ9UHF5 180 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 CFAP20Q9Y6A4 193 aaKnown RBP17.31■□□□□ 0.36
HDDC3-201ENST00000330334 CAPN6Q9Y6Q1 641 aa17.31■□□□□ 0.36
HDDC3-201ENST00000330334 FLNBO75369 2602 aaKnown RBP17.31■□□□□ 0.36
HDDC3-201ENST00000330334 TERTO14746 1132 aaKnown RBP17.3■□□□□ 0.36
HDDC3-201ENST00000330334 AP2A2O94973 939 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 POLBP06746 335 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 TPH1P17752 444 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 CCR10P46092 362 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 HSD11B2P80365 405 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 CACNG1Q06432 222 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 CDC20Q12834 499 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 LAMB3Q13751 1172 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 GSE1Q14687 1217 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 OASLQ15646 514 aaKnown RBP17.3■□□□□ 0.36
HDDC3-201ENST00000330334 SKIDA1Q1XH10 827 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 DNTTIP2Q5QJE6 756 aaKnown RBP17.3■□□□□ 0.36
HDDC3-201ENST00000330334 SERPINA9Q86WD7 417 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 SPC24Q8NBT2 197 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 STARD8Q92502 1023 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 RMDN2Q96LZ7 410 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 MAP3K3Q99759 626 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 FAM117AQ9C073 453 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 FAM96AQ9H5X1 160 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 KCND3Q9UK17 655 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 RARRES3Q9UL19 164 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 PADI1Q9ULC6 663 aa17.3■□□□□ 0.36
HDDC3-201ENST00000330334 BSNQ9UPA5 3926 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 UBA6A0AVT1 1052 aaPredicted RBP17.29■□□□□ 0.36
HDDC3-201ENST00000330334 GOLGA6L6A8MZA4 724 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 MATN2O00339 956 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 QSOX1O00391 747 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 KRT86O43790 486 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 KIAA0754O94854 1291 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 SUN1O94901 812 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 CCNYL3P0C7X3 344 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 FOLR1P15328 257 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 CDKN1CP49918 316 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms