RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 C8orf82Q6P1X6 216 aaPredicted RBP17.85■□□□□ 0.45
SMPD3-211ENST00000568373 C7orf61Q8IZ16 206 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 DCBLD1Q8N8Z6 715 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 CDK15Q96Q40 435 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 APOL5Q9BWW9 433 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 SPAG4Q9NPE6 437 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 ELOVL2Q9NXB9 296 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 DPP7Q9UHL4 492 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 GPR45Q9Y5Y3 372 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 ST14Q9Y5Y6 855 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 TTC34A8MYJ7 566 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 NR5A2O00482 541 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 OR7A17O14581 309 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 TAPBPO15533 448 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 BCAS2O75934 225 aaPredicted RBP17.84■□□□□ 0.45
SMPD3-211ENST00000568373 CBSLP0DN79 551 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 ZNF30P17039 623 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 VCLP18206 1134 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 CBSP35520 551 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 MRPL19P49406 292 aaKnown RBP17.84■□□□□ 0.45
SMPD3-211ENST00000568373 DHCR24Q15392 516 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 PCYOX1LQ8NBM8 494 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 OR2T11Q8NH01 316 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 GDPD5Q8WTR4 605 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 DLG3Q92796 817 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 ROPN1LQ96C74 230 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 ABCG8Q9H221 673 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 MTIF3Q9H2K0 278 aaKnown RBP17.84■□□□□ 0.45
SMPD3-211ENST00000568373 PKD2L2Q9NZM6 624 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 FBXO10Q9UK96 956 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 CROTQ9UKG9 612 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 LRCH1Q9Y2L9 728 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 ACOT8O14734 319 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 LEFTY1O75610 366 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 CYP2A6P11509 494 aaPredicted RBP17.84■□□□□ 0.45
SMPD3-211ENST00000568373 SYN1P17600 705 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 WEE1P30291 646 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 HSPA7P48741 367 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 DIO3P55073 304 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 SCIMPQ6UWF3 145 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 CELF5Q8N6W0 485 aaKnown RBP17.84■□□□□ 0.45
SMPD3-211ENST00000568373 BHLHE22Q8NFJ8 381 aaPredicted RBP17.84■□□□□ 0.45
SMPD3-211ENST00000568373 ITFG1Q8TB96 612 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 LRRC3BQ96PB8 259 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 EGFL8Q99944 293 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 RDH14Q9HBH5 336 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 RIC8BQ9NVN3 520 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 AIG1Q9NVV5 245 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 SUCOQ9UBS9 1254 aaKnown RBP17.84■□□□□ 0.45
SMPD3-211ENST00000568373 TMPRSS11EQ9UL52 423 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 SLC8A2Q9UPR5 921 aa17.84■□□□□ 0.45
SMPD3-211ENST00000568373 OTCP00480 354 aa17.83■□□□□ 0.45
SMPD3-211ENST00000568373 CAPN1P07384 714 aa17.83■□□□□ 0.45
SMPD3-211ENST00000568373 VIPR1P32241 457 aa17.83■□□□□ 0.45
SMPD3-211ENST00000568373 ARL1P40616 181 aaPredicted RBP17.83■□□□□ 0.45
SMPD3-211ENST00000568373 GRIK2Q13002 908 aa17.83■□□□□ 0.45
SMPD3-211ENST00000568373 ARSIQ5FYB1 569 aa17.83■□□□□ 0.45
SMPD3-211ENST00000568373 SULT1C3Q6IMI6 304 aa17.83■□□□□ 0.45
SMPD3-211ENST00000568373 IZUMO2Q6UXV1 221 aa17.83■□□□□ 0.45
SMPD3-211ENST00000568373 RETREG3Q86VR2 466 aa17.83■□□□□ 0.45
SMPD3-211ENST00000568373 METTL6Q8TCB7 284 aa17.83■□□□□ 0.45
SMPD3-211ENST00000568373 ASB9Q96DX5 294 aa17.83■□□□□ 0.45
SMPD3-211ENST00000568373 IPPKQ9H8X2 491 aa17.83■□□□□ 0.45
SMPD3-211ENST00000568373 CD84Q9UIB8 345 aa17.83■□□□□ 0.45
SMPD3-211ENST00000568373 NDUFAF1Q9Y375 327 aa17.83■□□□□ 0.45
SMPD3-211ENST00000568373 TSPAN11A1L157 253 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 CYP17A1P05093 508 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 OR56A5P0C7T3 313 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 TCN1P20061 433 aaPredicted RBP17.83■□□□□ 0.44
SMPD3-211ENST00000568373 CAPN3P20807 821 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 CCR7P32248 378 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 ERVK-8P63133 956 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 ZFP1Q6P2D0 407 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 LAYNQ6UX15 382 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 RBM23Q86U06 439 aaKnown RBP17.83■□□□□ 0.44
SMPD3-211ENST00000568373 FAM156AQ8NDB6 213 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 OR4F6Q8NGB9 312 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 UBTD2Q8WUN7 234 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 ATP6V1E2Q96A05 226 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 RHBDF1Q96CC6 855 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 TMEM79Q9BSE2 394 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 SPATA16Q9BXB7 569 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 PIDD1Q9HB75 910 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 SMOXQ9NWM0 555 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 DUS2Q9NX74 493 aaKnown RBP17.83■□□□□ 0.44
SMPD3-211ENST00000568373 WWOXQ9NZC7 414 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 TMEM181Q9P2C4 612 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 PSMD13Q9UNM6 376 aa17.83■□□□□ 0.44
SMPD3-211ENST00000568373 NUP210Q8TEM1 1887 aaPredicted RBP17.82■□□□□ 0.44
SMPD3-211ENST00000568373 UPK3BL1B0FP48 263 aa17.82■□□□□ 0.44
SMPD3-211ENST00000568373 UPK3BL2E5RIL1 263 aa17.82■□□□□ 0.44
SMPD3-211ENST00000568373 EIF3FO00303 357 aaPredicted RBP17.82■□□□□ 0.44
SMPD3-211ENST00000568373 ANGPT2O15123 496 aa17.82■□□□□ 0.44
SMPD3-211ENST00000568373 CTSLP07711 333 aa17.82■□□□□ 0.44
SMPD3-211ENST00000568373 ADH5P11766 374 aa17.82■□□□□ 0.44
SMPD3-211ENST00000568373 DGKGP49619 791 aa17.82■□□□□ 0.44
SMPD3-211ENST00000568373 VASPP50552 380 aaPredicted RBP17.82■□□□□ 0.44
SMPD3-211ENST00000568373 CLNS1AP54105 237 aaKnown RBP17.82■□□□□ 0.44
SMPD3-211ENST00000568373 MRPS22P82650 360 aaKnown RBP17.82■□□□□ 0.44
SMPD3-211ENST00000568373 TRAF3Q13114 568 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms