RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 DUS1LQ6P1R4 473 aaKnown RBP11.59□□□□□ -0.55
RAB5C-204ENST00000547517 LRRC8BQ6P9F7 803 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 ZNF574Q6ZN55 896 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-204ENST00000547517 TMEM26Q6ZUK4 368 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 LSMEM2Q8N112 164 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 FBXO39Q8N4B4 442 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 LILRA3Q8N6C8 439 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-204ENST00000547517 CLDN19Q8N6F1 224 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 OR4D9Q8NGE8 314 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 CPT1BQ92523 772 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 PEX13Q92968 403 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 PRR11Q96HE9 360 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-204ENST00000547517 LINC00615Q96LM1 132 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-204ENST00000547517 WWP1Q9H0M0 922 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 VPS37BQ9H9H4 285 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 ASCL3Q9NQ33 180 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 THSD1Q9NS62 852 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 BFARQ9NZS9 450 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 PISDQ9UG56 409 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 NEU2Q9Y3R4 380 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 SAR1BQ9Y6B6 198 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 PRSS21Q9Y6M0 314 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 APC2O95996 2303 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 KLHL33A6NCF5 533 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 FANCGO15287 622 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 AVILO75366 819 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 DXOO77932 396 aaKnown RBP11.58□□□□□ -0.56
RAB5C-204ENST00000547517 POLBP06746 335 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 JMJD7P0C870 316 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 THRAP10827 490 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 MTHFD1P11586 935 aaKnown RBP11.58□□□□□ -0.56
RAB5C-204ENST00000547517 TYRP1P17643 537 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 ITIH1P19827 911 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 NMBRP28336 390 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 NSG1P42857 185 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 NPY2RP49146 381 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 LIMK2P53671 638 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 SARNPP82979 210 aaKnown RBP11.58□□□□□ -0.56
RAB5C-204ENST00000547517 GPR18Q14330 331 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 SEMA3AQ14563 771 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 ITIH4Q14624 930 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 C16orf72Q14CZ0 275 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 FASTKD1Q53R41 847 aaKnown RBP11.58□□□□□ -0.56
RAB5C-204ENST00000547517 SNAP47Q5SQN1 464 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 METRNLQ641Q3 311 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 CASC4Q6P4E1 433 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 CES3Q6UWW8 571 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 XKR5Q6UX68 686 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 PACS1Q6VY07 963 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 JAMLQ86YT9 394 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 KLHL7Q8IXQ5 586 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 CFAP206Q8IYR0 622 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 OTUD6BQ8N6M0 293 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 SPDYE1Q8NFV5 336 aaPredicted RBP11.58□□□□□ -0.56
RAB5C-204ENST00000547517 OR4L1Q8NH43 312 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 SNIP1Q8TAD8 396 aaKnown RBP11.58□□□□□ -0.56
RAB5C-204ENST00000547517 JPH3Q8WXH2 748 aaPredicted RBP11.58□□□□□ -0.56
RAB5C-204ENST00000547517 NCSTNQ92542 709 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 NAF1Q96HR8 494 aaKnown RBP11.58□□□□□ -0.56
RAB5C-204ENST00000547517 RMDN2Q96LZ7 410 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 C12orf66Q96MD2 445 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 CMKLR1Q99788 373 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 DPYSL5Q9BPU6 564 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 COG4Q9H9E3 785 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 UCK1Q9HA47 277 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 TREX1Q9NSU2 369 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 CATSPERZQ9NTU4 200 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 AKAP7Q9P0M2 348 aaPredicted RBP11.58□□□□□ -0.56
RAB5C-204ENST00000547517 MARCH4Q9P2E8 410 aaPredicted RBP11.58□□□□□ -0.56
RAB5C-204ENST00000547517 KLHL3Q9UH77 587 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 ASIC3Q9UHC3 531 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 UNC13CQ8NB66 2214 aa11.58□□□□□ -0.56
RAB5C-204ENST00000547517 KIF26BQ2KJY2 2108 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 ZZEF1O43149 2961 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 A8MU76 341 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 OR1I1O60431 355 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 UBXN7O94888 489 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 AP2A2O94973 939 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 ITGA2BP08514 1039 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 PREPP48147 710 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 PCBP4P57723 403 aaKnown RBP11.57□□□□□ -0.56
RAB5C-204ENST00000547517 ERVPABLB-1P60509 514 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 SQSTM1Q13501 440 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 PLCL1Q15111 1095 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 AARS2Q5JTZ9 985 aaKnown RBP11.57□□□□□ -0.56
RAB5C-204ENST00000547517 LYPLAL1Q5VWZ2 237 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 TMEM71Q6P5X7 295 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 WDR74Q6RFH5 385 aaPredicted RBP11.57□□□□□ -0.56
RAB5C-204ENST00000547517 IGF2-ASQ6U949 168 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 LDB1Q86U70 411 aaPredicted RBP11.57□□□□□ -0.56
RAB5C-204ENST00000547517 CAND1Q86VP6 1230 aaKnown RBP11.57□□□□□ -0.56
RAB5C-204ENST00000547517 CREG2Q8IUH2 290 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 RBM12BQ8IXT5 1001 aaKnown RBP11.57□□□□□ -0.56
RAB5C-204ENST00000547517 MPP5Q8N3R9 675 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 RSC1A1Q92681 617 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 FGF11Q92914 225 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 TMEM159Q96B96 161 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 MFSD3Q96ES6 412 aa11.57□□□□□ -0.56
RAB5C-204ENST00000547517 ZNF578Q96N58 590 aaPredicted RBP11.57□□□□□ -0.56
RAB5C-204ENST00000547517 SLC46A1Q96NT5 459 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms