RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 IGFLR1Q9H665 355 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 PFDN4Q9NQP4 134 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 B3GNT3Q9Y2A9 372 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 TRAF6Q9Y4K3 522 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 KCTD3Q9Y597 815 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 ACTL7AQ9Y615 435 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 A8MT66 165 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 H0YAE9 185 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 H7C0S8 307 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 FZD6O60353 706 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 WISP3O95389 354 aaPredicted RBP18.08■□□□□ 0.48
SDC2-202ENST00000518385 JUNP05412 331 aaKnown RBP18.08■□□□□ 0.48
SDC2-202ENST00000518385 SUOXP51687 545 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 STC1P52823 247 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 HYAL1Q12794 435 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 PDCD4Q53EL6 469 aaKnown RBP18.08■□□□□ 0.48
SDC2-202ENST00000518385 TBCELQ5QJ74 424 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 LINC00299Q6ZSB3 139 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 CLVS1Q8IUQ0 354 aaPredicted RBP18.08■□□□□ 0.48
SDC2-202ENST00000518385 TBC1D21Q8IYX1 336 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 MYO1HQ8N1T3 1032 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 ZBTB8BQ8NAP8 495 aaPredicted RBP18.08■□□□□ 0.48
SDC2-202ENST00000518385 HMGCLL1Q8TB92 370 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 COX4I2Q96KJ9 171 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 SLC29A1Q99808 456 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 TRIM54Q9BYV2 358 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 ZNF576Q9H609 170 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 NOL11Q9H8H0 719 aaKnown RBP18.08■□□□□ 0.48
SDC2-202ENST00000518385 TDP1Q9NUW8 608 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 GNPTGQ9UJJ9 305 aa18.08■□□□□ 0.48
SDC2-202ENST00000518385 MRPS23Q9Y3D9 190 aaKnown RBP18.08■□□□□ 0.48
SDC2-202ENST00000518385 MYO9BQ13459 2157 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 NPPAP01160 153 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 F7P08709 466 aaPredicted RBP18.07■□□□□ 0.48
SDC2-202ENST00000518385 JUNBP17275 347 aaPredicted RBP18.07■□□□□ 0.48
SDC2-202ENST00000518385 TCN1P20061 433 aaPredicted RBP18.07■□□□□ 0.48
SDC2-202ENST00000518385 CD9P21926 228 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 FDXRP22570 491 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 MOGQ16653 247 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 TCEAL5Q5H9L2 206 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 RBM20Q5T481 1227 aaKnown RBP18.07■□□□□ 0.48
SDC2-202ENST00000518385 BBS7Q8IWZ6 715 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 EFHBQ8N7U6 833 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 TRPV3Q8NET8 790 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 LPCAT1Q8NF37 534 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 OR13C4Q8NGS5 318 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 SH3RF2Q8TEC5 729 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 PPP1R36Q96LQ0 422 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 NSMCE3Q96MG7 304 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 CIB1Q99828 191 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 SMG9Q9H0W8 520 aaKnown RBP18.07■□□□□ 0.48
SDC2-202ENST00000518385 PCDHAC1Q9H158 963 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 SEMA6AQ9H2E6 1030 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 ABCB8Q9NUT2 735 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 RHBDL2Q9NX52 303 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 PKD2L2Q9NZM6 624 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 MARCH4Q9P2E8 410 aaPredicted RBP18.07■□□□□ 0.48
SDC2-202ENST00000518385 SPO11Q9Y5K1 396 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 SLC30A1Q9Y6M5 507 aa18.07■□□□□ 0.48
SDC2-202ENST00000518385 AURKAO14965 403 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 SOCS5O75159 536 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 DNAJB5O75953 348 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 CEBPBP17676 345 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 GPX3P22352 226 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 MSX2P35548 267 aaPredicted RBP18.06■□□□□ 0.48
SDC2-202ENST00000518385 CAPGP40121 348 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 CCR10P46092 362 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 SLC7A2P52569 658 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 TMBIM6P55061 237 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 TRAF2Q12933 501 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 ZNF789Q5FWF6 425 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 AARS2Q5JTZ9 985 aaKnown RBP18.06■□□□□ 0.48
SDC2-202ENST00000518385 ARMC12Q5T9G4 340 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 LINGO4Q6UY18 593 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 RAB44Q7Z6P3 723 aaPredicted RBP18.06■□□□□ 0.48
SDC2-202ENST00000518385 MIER2Q8N344 545 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 OR4K2Q8NGD2 314 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 ITFG1Q8TB96 612 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 OSCP1Q8WVF1 389 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 ABTB1Q969K4 478 aaPredicted RBP18.06■□□□□ 0.48
SDC2-202ENST00000518385 C12orf43Q96C57 262 aaKnown RBP18.06■□□□□ 0.48
SDC2-202ENST00000518385 THAP11Q96EK4 314 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 NRBF2Q96F24 287 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 MAGED4Q96JG8 741 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 EXOC2Q96KP1 924 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 ZSWIM3Q96MP5 696 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 OLFM1Q99784 485 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 CCDC167Q9P0B6 97 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 CCL26Q9Y258 94 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 PCDHGC4Q9Y5F7 938 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 COMMD10Q9Y6G5 202 aa18.06■□□□□ 0.48
SDC2-202ENST00000518385 HELZP42694 1942 aaKnown RBP18.05■□□□□ 0.48
SDC2-202ENST00000518385 TRANK1O15050 2925 aa18.05■□□□□ 0.48
SDC2-202ENST00000518385 TCF3P15923 654 aa18.05■□□□□ 0.48
SDC2-202ENST00000518385 PORP16435 677 aaPredicted RBP18.05■□□□□ 0.48
SDC2-202ENST00000518385 WEE1P30291 646 aa18.05■□□□□ 0.48
SDC2-202ENST00000518385 PHEXP78562 749 aa18.05■□□□□ 0.48
SDC2-202ENST00000518385 SLC44A4Q53GD3 710 aa18.05■□□□□ 0.48
SDC2-202ENST00000518385 PTRH1Q86Y79 214 aaKnown RBP18.05■□□□□ 0.48
SDC2-202ENST00000518385 DHRSXQ8N5I4 330 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms