RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 SEC61A1P61619 476 aaKnown RBP5.27□□□□□ -1.57
SSR3-208ENST00000496050 TUBA1BP68363 451 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 PPARDQ03181 441 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 RBPJQ06330 500 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 PLA2G7Q13093 441 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 CKAP5Q14008 2032 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 GCNT6Q5T4J0 391 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 RNASEH2BQ5TBB1 312 aaKnown RBP5.27□□□□□ -1.57
SSR3-208ENST00000496050 KRT39Q6A163 491 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 PLEKHM3Q6ZWE6 761 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 CENPVQ7Z7K6 275 aaPredicted RBP5.27□□□□□ -1.57
SSR3-208ENST00000496050 MFN1Q8IWA4 741 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 MAML2Q8IZL2 1156 aaPredicted RBP5.27□□□□□ -1.57
SSR3-208ENST00000496050 FAM9BQ8IZU0 186 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 C1orf87Q8N0U7 546 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 CAMKVQ8NCB2 501 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 CLEC18CQ8NCF0 446 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 KCNH5Q8NCM2 988 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 SETD6Q8TBK2 473 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 LINC00615Q96LM1 132 aaPredicted RBP5.27□□□□□ -1.57
SSR3-208ENST00000496050 ST6GALNAC4Q9H4F1 302 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 CNOT10Q9H9A5 744 aaKnown RBP5.27□□□□□ -1.57
SSR3-208ENST00000496050 GRPEL1Q9HAV7 217 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 RNF7Q9UBF6 113 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 GTF3C4Q9UKN8 822 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 VDAC3Q9Y277 283 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 NME7Q9Y5B8 376 aa5.27□□□□□ -1.57
SSR3-208ENST00000496050 OR5K3A6NET4 321 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 PROB1E7EW31 1015 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 DVL1O14640 695 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 XRCC3O43542 346 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 PMS2P2O95744 297 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 LINC00271P0C7V0 271 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 MYOD1P15172 320 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 ZNF12P17014 697 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 POLR2CP19387 275 aaPredicted RBP5.26□□□□□ -1.57
SSR3-208ENST00000496050 ACHEP22303 614 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 GP5P40197 560 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 USP8P40818 1118 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 MTHFRP42898 656 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 SLC9A3P48764 834 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 PLIN5Q00G26 463 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 DLG1Q12959 904 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 GTF2H2Q13888 395 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 SCARB2Q14108 478 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 ZNF234Q14588 700 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 PLA2G4FQ68DD2 849 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 GTF2H2CQ6P1K8 395 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 Q75L30 129 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 TMPRSS12Q86WS5 348 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 GBGT1Q8N5D6 347 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 MOSPD2Q8NHP6 518 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 SLC20A1Q8WUM9 679 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 SLC38A5Q8WUX1 472 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 MIB2Q96AX9 1013 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 PHF21AQ96BD5 680 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 MTERF3Q96E29 417 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 SEPHS2Q99611 448 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 NEURL2Q9BR09 285 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 C16orf70Q9BSU1 422 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 DPP3Q9NY33 737 aa5.26□□□□□ -1.57
SSR3-208ENST00000496050 SOS1Q07889 1333 aaPredicted RBP5.25□□□□□ -1.57
SSR3-208ENST00000496050 A0A0G2JPF8 293 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 ANKUB1A6NFN9 424 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 HNRNPCL3B7ZW38 293 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 ZNHIT1O43257 154 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 SLCO2B1O94956 709 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 C22orf31O95567 290 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 LDLRP01130 860 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 ACAA1P09110 424 aaPredicted RBP5.25□□□□□ -1.57
SSR3-208ENST00000496050 DANCRP0C864 163 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 FAM106CPP0CH98 169 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 HNRNPCL4P0DMR1 293 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 DAOP14920 347 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 TCEA1P23193 301 aaKnown RBP5.25□□□□□ -1.57
SSR3-208ENST00000496050 CCR10P46092 362 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 TERF1P54274 439 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 ISL1P61371 349 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 SLC20A2Q08357 652 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 BFSP1Q12934 665 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 SF3B4Q15427 424 aaKnown RBP eCLIP5.25□□□□□ -1.57
SSR3-208ENST00000496050 HYAL4Q2M3T9 481 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 SETMARQ53H47 684 aaPredicted RBP5.25□□□□□ -1.57
SSR3-208ENST00000496050 RAB6CQ53S08 254 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 AWAT2Q6E213 333 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 C9orf47Q6ZRZ4 202 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 DET1Q7L5Y6 550 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 ZNF595Q8IYB9 648 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 OR8H3Q8N146 312 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 OR52I2Q8NH67 350 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 SPATA22Q8NHS9 363 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 B4GALNT2Q8NHY0 566 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 DEPDC1BQ8WUY9 529 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 TMEM255BQ8WV15 326 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 FIG4Q92562 907 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 CAMK1GQ96NX5 476 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 OLFM1Q99784 485 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 TMEM204Q9BSN7 226 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 SYT17Q9BSW7 474 aa5.25□□□□□ -1.57
SSR3-208ENST00000496050 ABHD6Q9BV23 337 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms