RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CNOT10Q9H9A5 744 aaKnown RBP4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 EBF2Q9HAK2 575 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 RANGRFQ9HD47 186 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 LZTFL1Q9NQ48 299 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 ELOVL5Q9NYP7 299 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 CISD1Q9NZ45 108 aaKnown RBP4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 IL36RNQ9UBH0 155 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 ERVK-11Q9UQG0 969 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 MYH1P12882 1939 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 AFDNP55196 1824 aaKnown RBP4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 RIMBP3Q9UFD9 1639 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 SH3TC1Q8TE82 1336 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 PTPRMP28827 1452 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 CARMIL3Q8ND23 1372 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 KIF13AQ9H1H9 1805 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 TMEM202A6NGA9 273 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 DNAJC9-AS1A6NH13 148 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 E7ENQ6 273 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 I6L893 689 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 PSMD14O00487 310 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 SMIM24O75264 130 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 MOSPD3O75425 235 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 ATP6V1G2O95670 118 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 CASP14P31944 242 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 CYLC1P35663 651 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 SYKP43405 635 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 RANBP1P43487 201 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 ZNF131P52739 623 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 SORDQ00796 357 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 NAE1Q13564 534 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 ITIH4Q14624 930 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 ADIPOQQ15848 244 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 PTGISQ16647 500 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 SOWAHCQ53LP3 525 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 ANKRD20A8PQ5CZ79 823 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 HHATQ5VTY9 493 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 OTUD1Q5VV17 481 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 C11orf87Q6NUJ2 197 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 C8orf74Q6P047 294 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 COLCA1Q6ZS62 124 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 Q6ZSV7 163 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 BZW1Q7L1Q6 419 aaKnown RBP4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 ZNF367Q7RTV3 350 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 CTU1Q7Z7A3 348 aaKnown RBP4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 CROCCP2Q86T23 111 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 HAPLN4Q86UW8 402 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 PIM3Q86V86 326 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 NLRP14Q86W24 1093 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 SLC35F6Q8N357 371 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 ARHGAP18Q8N392 663 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 NRACQ8N912 160 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 CCDC63Q8NA47 563 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 MLKLQ8NB16 471 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 AGBL3Q8NEM8 1001 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 ARRDC2Q8TBH0 407 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 NSMCE1Q8WV22 266 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 SNRNP27Q8WVK2 155 aaKnown RBP4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 C17orf50Q8WW18 174 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 PPP1R14BQ96C90 147 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 RAB3IPQ96QF0 476 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 CCDC28BQ9BUN5 200 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 MAK16Q9BXY0 300 aaKnown RBP4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 YIPF3Q9GZM5 350 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 GOLPH3LQ9H4A5 285 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 CIDEBQ9UHD4 219 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 TMEM5Q9Y2B1 443 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 TTLL3Q9Y4R7 772 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 GMEB1Q9Y692 573 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 SAR1BQ9Y6B6 198 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 MAU2Q9Y6X3 613 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 CACNA1IQ9P0X4 2223 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 KIDINS220Q9ULH0 1771 aa4.45□□□□□ -1.7
HMGB1P16-201ENST00000447155 RPS10-NUDT3A0A1W2PQS6 291 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 ENO4A6NNW6 628 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 CDRT15L2A8MXV6 281 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 BTBD18B2RXH4 712 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 VWA5AO00534 786 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 IFIT3O14879 490 aaKnown RBP4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 WNT9BO14905 357 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 ITM2AO43736 263 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 SOX30O94993 753 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 LCATP04180 440 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 TMEM11P17152 192 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 HOXA13P31271 388 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 PIK3CAP42336 1068 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 RAD52P43351 418 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 ZBED6P86452 979 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 TFAP4Q01664 338 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 PPATQ06203 517 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 IFT88Q13099 833 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 MYBPC2Q14324 1141 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 NAB2Q15742 525 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 SGSM1Q2NKQ1 1148 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 C2orf68Q2NKX9 166 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 ASTE1Q2TB18 679 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 ODF3L2Q3SX64 289 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 CCDC152Q4G0S7 254 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 LACTB2Q53H82 288 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 CCDC92Q53HC0 331 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 RAB41Q5JT25 222 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms