RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 SUCOQ9UBS9 1254 aaKnown RBP8.72□□□□□ -1.01
RTN4-206ENST00000394611 UTS2RQ9UKP6 389 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 IKZF3Q9UKT9 509 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 PCDHGA8Q9Y5G5 932 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 PLXNA1Q9UIW2 1896 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 DNAH12Q6ZR08 3092 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 A0A1W2PQ72 361 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 EVPLLA8MZ36 301 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 STX7O15400 261 aaKnown RBP8.71□□□□□ -1.01
RTN4-206ENST00000394611 C1RP00736 705 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 ATP5BP06576 529 aaKnown RBP8.71□□□□□ -1.01
RTN4-206ENST00000394611 FHP07954 510 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 SSTR4P31391 388 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 ACADSBP45954 432 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 HSPA7P48741 367 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 FLT3LGP49771 235 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 NIPAL4Q0D2K0 466 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 DAG1Q14118 895 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 PAQR3Q6TCH7 311 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 SCML4Q8N228 414 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 TFAP2CQ92754 450 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 NACC2Q96BF6 587 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 PYCR2Q96C36 320 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 ART5Q96L15 291 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 MLPHQ9BV36 600 aaPredicted RBP8.71□□□□□ -1.01
RTN4-206ENST00000394611 GPR63Q9BZJ6 419 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 WDR12Q9GZL7 423 aaKnown RBP8.71□□□□□ -1.01
RTN4-206ENST00000394611 ZBTB20Q9HC78 741 aaPredicted RBP8.71□□□□□ -1.01
RTN4-206ENST00000394611 KRT84Q9NSB2 600 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 SNTG1Q9NSN8 517 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 MAP3K20Q9NYL2 800 aaKnown RBP8.71□□□□□ -1.01
RTN4-206ENST00000394611 LEF1Q9UJU2 399 aaPredicted RBP8.71□□□□□ -1.01
RTN4-206ENST00000394611 ERGIC3Q9Y282 383 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 WBP11Q9Y2W2 641 aaKnown RBP8.71□□□□□ -1.01
RTN4-206ENST00000394611 CPQQ9Y646 472 aa8.71□□□□□ -1.01
RTN4-206ENST00000394611 BRWD1Q9NSI6 2320 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 DFNA5O60443 496 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 FCER2P06734 321 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 NPR3P17342 541 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 IL12RB1P42701 662 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 BRCC3P46736 316 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 OR2B6P58173 313 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 MAP2K5Q13163 448 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 NFE2L1Q14494 772 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 SLC25A52Q3SY17 297 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 ARMCX4Q5H9R4 360 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 CEP78Q5JTW2 689 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 PDZK1Q5T2W1 519 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 ELMSAN1Q6PJG2 1045 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 SLC22A9Q8IVM8 553 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 TIGD4Q8IY51 512 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 GPR65Q8IYL9 337 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 CADM2Q8N3J6 435 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 NCSTNQ92542 709 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 CLIP3Q96DZ5 547 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 CCDC126Q96EE4 140 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 FCRL2Q96LA5 508 aaPredicted RBP8.71□□□□□ -1.02
RTN4-206ENST00000394611 COLEC11Q9BWP8 271 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 RNF167Q9H6Y7 350 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 PLAC1Q9HBJ0 212 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 MARCH4Q9P2E8 410 aaPredicted RBP8.71□□□□□ -1.02
RTN4-206ENST00000394611 TPRKBQ9Y3C4 175 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 SPEF1Q9Y4P9 236 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 SPAG17Q6Q759 2223 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 TRIP11Q15643 1979 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 ZNF99A8MXY4 864 aaPredicted RBP8.71□□□□□ -1.02
RTN4-206ENST00000394611 SPATA31C2B4DYI2 1134 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 GPR182O15218 404 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 NUPL2O15504 423 aaKnown RBP8.71□□□□□ -1.02
RTN4-206ENST00000394611 AQP9O43315 295 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 NIPSNAP2O75323 286 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 TBX18O95935 607 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 VIPP01282 170 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 SERPIND1P05546 499 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 GPIP06744 558 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 GLUD2P49448 558 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 ZNF132P52740 706 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 SH3BP2P78314 561 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 ZXDBP98169 803 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 CD47Q08722 323 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 DPYSL2Q16555 572 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 SPDYE7PQ495Y7 208 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 SV2CQ496J9 727 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 CACHD1Q5VU97 1274 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 UGT3A1Q6NUS8 523 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 FAM180BQ6P0A1 224 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 CCBE1Q6UXH8 406 aaPredicted RBP8.71□□□□□ -1.02
RTN4-206ENST00000394611 SH2D5Q6ZV89 423 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 C16orf59Q7L2K0 433 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 METTL23Q86XA0 190 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 GALNT12Q8IXK2 581 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 FAM83FQ8NEG4 500 aaPredicted RBP8.71□□□□□ -1.02
RTN4-206ENST00000394611 SIPA1Q96FS4 1042 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 IL4I1Q96RQ9 567 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 CNPPD1Q9BV87 410 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 NKIRAS2Q9NYR9 191 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 ADAM28Q9UKQ2 775 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 SNX6Q9UNH7 406 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 ANKRD6Q9Y2G4 727 aa8.71□□□□□ -1.02
RTN4-206ENST00000394611 FAM32AQ9Y421 112 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms