RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 RASSF1Q9NS23 344 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 TOR4AQ9NXH8 423 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 GLYATL1P3A0A0U1RQE8 302 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 UBE2QL1A1L167 161 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.29□□□□□ -1.08
VPS36-201ENST00000378060 PGRMC2O15173 223 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 AIREO43918 545 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 OR4F21O95013 312 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 CAPN1P07384 714 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 TACR2P21452 398 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 CDH5P33151 784 aaPredicted RBP8.29□□□□□ -1.08
VPS36-201ENST00000378060 SLC1A2P43004 574 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 CCR3P51677 355 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 PNLIPRP1P54315 467 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 ATP12AP54707 1039 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 HERVK_113P63132 956 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 CREMQ03060 361 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 GNA12Q03113 381 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 CBX3Q13185 183 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 KLF1Q13351 362 aaPredicted RBP8.29□□□□□ -1.08
VPS36-201ENST00000378060 TEAD4Q15561 434 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 SH3PXD2AQ5TCZ1 1133 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 CAPN13Q6MZZ7 669 aaPredicted RBP8.29□□□□□ -1.08
VPS36-201ENST00000378060 C16orf62Q7Z3J2 963 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 PDSS2Q86YH6 399 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 HID1Q8IV36 788 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 UXS1Q8NBZ7 420 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 PIK3C3Q8NEB9 887 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 OR5K1Q8NHB7 308 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 SLC13A3Q8WWT9 602 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 SUSD6Q92537 303 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 PCED1BQ96HM7 432 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 SIGLEC10Q96LC7 697 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 NSMCE3Q96MG7 304 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 GPR22Q99680 433 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 ERVK-6Q9BXR3 956 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 BCO2Q9BYV7 579 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 KLHL31Q9H511 634 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 MOV10Q9HCE1 1003 aaKnown RBP8.29□□□□□ -1.08
VPS36-201ENST00000378060 GULP1Q9UBP9 304 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 TRPS1Q9UHF7 1281 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 STYXL1Q9Y6J8 313 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 MGAMO43451 1857 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 FAM240BA0A1B0GVZ2 78 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 GSAPA4D1B5 854 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 FADS2P1A8MWK0 482 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 TNFRSF11BO00300 401 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 BCAS2O75934 225 aaPredicted RBP8.29□□□□□ -1.08
VPS36-201ENST00000378060 GOT2P00505 430 aaKnown RBP8.29□□□□□ -1.08
VPS36-201ENST00000378060 C8BP07358 591 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 TIE1P35590 1138 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 SRSF11Q05519 484 aaKnown RBP8.29□□□□□ -1.08
VPS36-201ENST00000378060 SCN1BQ07699 218 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 ABRQ12979 859 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 GTF2H2Q13888 395 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 ZFP69Q49AA0 526 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 MSS51Q4VC12 460 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 PPM1LQ5SGD2 360 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 TMEM214Q6NUQ4 689 aaKnown RBP8.29□□□□□ -1.08
VPS36-201ENST00000378060 GTF2H2CQ6P1K8 395 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 IZUMO1Q8IYV9 350 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 ZBTB2Q8N680 514 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 TRPV3Q8NET8 790 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 PLEKHO2Q8TD55 490 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 EEF1AKMT1Q8WVE0 214 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 DNAJC1Q96KC8 554 aaKnown RBP8.29□□□□□ -1.08
VPS36-201ENST00000378060 OR52B2Q96RD2 323 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 OSBPL2Q9H1P3 480 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 ZNF358Q9NW07 568 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 C1orf109Q9NX04 203 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 KIAA1522Q9P206 1035 aaPredicted RBP8.29□□□□□ -1.08
VPS36-201ENST00000378060 MBD2Q9UBB5 411 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.29□□□□□ -1.08
VPS36-201ENST00000378060 GABRQQ9UN88 632 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 YJEFN3A6XGL0 299 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 E7ESA3 106 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 CXCR6O00574 342 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 EI24O14681 340 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 FPGTO14772 594 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 SLC22A1O15245 554 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 CA12O43570 354 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 MT-ND1P03886 318 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 CKMT2P17540 419 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 GPR1P46091 355 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 RPIAP49247 311 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 AP1S1P61966 158 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 SULT2A1Q06520 285 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 FAM110CQ1W6H9 321 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 SDHAF4Q5VUM1 108 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 TMEM198Q66K66 360 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 NCBP2-AS2Q69YL0 99 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 CHSY3Q70JA7 882 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 DET1Q7L5Y6 550 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 GALNT5Q7Z7M9 940 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 ZDHHC21Q8IVQ6 265 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 ZNF655Q8N720 491 aaPredicted RBP8.29□□□□□ -1.08
VPS36-201ENST00000378060 OR4A15Q8NGL6 344 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 MOSPD2Q8NHP6 518 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 CANT1Q8WVQ1 401 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 FAR1Q8WVX9 515 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms