RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 AMZ1Q400G9 498 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 ANKRD22Q5VYY1 191 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 METRNLQ641Q3 311 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 CASC4Q6P4E1 433 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 ZNF534Q76KX8 674 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 PIM3Q86V86 326 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 MARCH9Q86YJ5 346 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 PIANPQ8IYJ0 282 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 NAT8LQ8N9F0 302 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 OR10G6Q8NH81 332 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 CXorf40BQ96DE9 158 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 TRIM44Q96DX7 344 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 ZNF778Q96MU6 729 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 CNTNAP3BQ96NU0 1288 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 CCM2Q9BSQ5 444 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 CNTNAP3Q9BZ76 1288 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 EPB41L1Q9H4G0 881 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 CCDC86Q9H6F5 360 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 UCK1Q9HA47 277 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 TREX1Q9NSU2 369 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 CATSPERZQ9NTU4 200 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 SYBUQ9NX95 663 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 SOX13Q9UN79 622 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 AK5Q9Y6K8 562 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 SCN8AQ9UQD0 1980 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 OR51F1A6NGY5 319 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 D6RAR5 112 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 SMAPO00193 183 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 DNALI1O14645 258 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 NDC80O14777 642 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 OR56A5P0C7T3 313 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 PBLDP30039 288 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 PTGIRP43119 386 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 TTPAP49638 278 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 EPHA4P54764 986 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 DRG2P55039 364 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 INHBCP55103 352 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 CRADDP78560 199 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 SQSTM1Q13501 440 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 RTP5Q14D33 572 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 MAP9Q49MG5 647 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 PACS1Q6VY07 963 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 SDCCAG8Q86SQ7 713 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 CAND1Q86VP6 1230 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 HOOK3Q86VS8 718 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 CFAP206Q8IYR0 622 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 LSMEM2Q8N112 164 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 MPP5Q8N3R9 675 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 HM13Q8TCT9 377 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 SERPINB12Q96P63 405 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 TSSK1BQ9BXA7 367 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 TMEM121BQ9BXQ6 578 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 POT1Q9NUX5 634 aa16.96■□□□□ 0.31
SHKBP1-212ENST00000596163 IGHV1OR21-1A0A087WYE8 117 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 GOLGA8MH3BSY2 632 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 CD3EAPO15446 510 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 SGTAO43765 313 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 DUX1O43812 170 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 AVILO75366 819 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 TMEM63AO94886 807 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 FTH1P02794 183 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 TUBB4AP04350 444 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 PRSS56P0CW18 603 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 NMBRP28336 390 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 CD1CP29017 333 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 SLC19A1P41440 591 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 UBE2IP63279 158 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 EIF3IQ13347 325 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 NFE2L1Q14494 772 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 RNASEH2BQ5TBB1 312 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 MRNIPQ6NTE8 343 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 ZMYND15Q9H091 742 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 AKAP7Q9P0M2 348 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 SCHIP1Q9P0W5 487 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 ZNF624Q9P2J8 865 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 DKK4Q9UBT3 224 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 ENTPD2Q9Y5L3 495 aa16.95■□□□□ 0.3
SHKBP1-212ENST00000596163 FAM237BA0A1B0GVD1 139 aa16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 LILRA5A6NI73 299 aa16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 FANCGO15287 622 aa16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 SLC35G4P0C7Q5 338 aa16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 BRAFP15056 766 aa16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 CCKBRP32239 447 aa16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 PLOD1Q02809 727 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 RPA4Q13156 261 aa16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 KCTD19Q17RG1 926 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 DNAJC21Q5F1R6 531 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 IZUMO3Q5VZ72 239 aa16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 KIAA0930Q6ICG6 404 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 FAM83HQ6ZRV2 1179 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 TMEM26Q6ZUK4 368 aa16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 USP53Q70EK8 1073 aa16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 MAATS1Q7Z4T9 603 aa16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 JAMLQ86YT9 394 aa16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 CLDN19Q8N6F1 224 aa16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 OTUD6BQ8N6M0 293 aa16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 KDF1Q8NAX2 398 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 WDR36Q8NI36 951 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 TMEM159Q96B96 161 aa16.94■□□□□ 0.3
SHKBP1-212ENST00000596163 ATXN7L3BQ96GX2 97 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms