RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 GOLGA4Q13439 2230 aaKnown RBP16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 ASCC3Q8N3C0 2202 aaKnown RBP16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 A0A087WUV0 522 aaPredicted RBP16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 SGTAO43765 313 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 OR1I1O60431 355 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 ESR1P03372 595 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 ZNF883P0CG24 379 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 ATP1A2P50993 1020 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 CTSCP53634 463 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 ATXN3P54252 364 aaPredicted RBP16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 MAGOHP61326 146 aaKnown RBP16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 NAB1Q13506 487 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 LRP8Q14114 963 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 AGBL2Q5U5Z8 902 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 MARK2Q7KZI7 788 aaKnown RBP16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 RD3Q7Z3Z2 195 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 ZNF547Q8IVP9 402 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 CLDN19Q8N6F1 224 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 PNPLA1Q8N8W4 532 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 CYTH2Q99418 400 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 PHOX2BQ99453 314 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 P2RY12Q9H244 342 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 SPASTQ9UBP0 616 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 RABGEF1Q9UJ41 708 aa16.82■□□□□ 0.28
RPRD1A-209ENST00000590898 AHSGP02765 367 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 OR56A5P0C7T3 313 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 NR1D1P20393 614 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 GNPDA1P46926 289 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 PRLHRP49683 370 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 ZNF542PQ5EBM4 170 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 PRAMEF14Q5SWL7 426 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 TCEAL6Q6IPX3 200 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 ASCL5Q7RTU5 278 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 TRAPPC5Q8IUR0 188 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 CYP4X1Q8N118 509 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 TCEAL3Q969E4 200 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 TLCD1Q96CP7 247 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 MRRFQ96E11 262 aaKnown RBP16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 PGM2Q96G03 612 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 BIRC8Q96P09 236 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 OR2M4Q96R27 311 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 TIMM29Q9BSF4 260 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 ACSS3Q9H6R3 686 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 APOBEC3BQ9UH17 382 aaKnown RBP16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 TBK1Q9UHD2 729 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 RAPGEFL1Q9UHV5 662 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 COMMD10Q9Y6G5 202 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 CSNK1G3Q9Y6M4 447 aa16.81■□□□□ 0.28
RPRD1A-209ENST00000590898 C17orf113A0A1B0GUU1 675 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 EXOC1LA0A1B0GW35 172 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 H3BMM5 538 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 RGS16O15492 202 aaPredicted RBP16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 HAUS5O94927 633 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 CTSEP14091 401 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 CLCNKAP51800 687 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 ELOCQ15369 112 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 SF3A2Q15428 464 aaKnown RBP16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 SMAD1Q15797 465 aaKnown RBP16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 KBTBD12Q3ZCT8 623 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 C11orf96Q7Z7L8 435 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 FSTL5Q8N475 847 aaPredicted RBP16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 GPBAR1Q8TDU6 330 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 CCDC97Q96F63 343 aaPredicted RBP16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 CPNE1Q99829 537 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 ROPN1BQ9BZX4 212 aaPredicted RBP16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 ROPN1Q9HAT0 212 aaPredicted RBP16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 PARD6AQ9NPB6 346 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 FSCN3Q9NQT6 498 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 SMYD2Q9NRG4 433 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 DNAAF2Q9NVR5 837 aaKnown RBP16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 GNPTGQ9UJJ9 305 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 CORO1CQ9ULV4 474 aaPredicted RBP16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 CRYL1Q9Y2S2 319 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 GPSM3Q9Y4H4 160 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 PCYT1BQ9Y5K3 369 aaPredicted RBP16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 UBA6A0AVT1 1052 aaPredicted RBP16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 OR2AG2A6NM03 316 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 POC1B-GALNT4F8VUJ3 575 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 PIAS2O75928 621 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 GABRB3P28472 473 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 SHBQ15464 509 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 ZNF789Q5FWF6 425 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 PRR23CQ6ZRP0 262 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 DET1Q7L5Y6 550 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 DCLK2Q8N568 766 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 MINDY1Q8N5J2 469 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 GTPBP2Q9BX10 602 aaKnown RBP16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 TMEM168Q9H0V1 697 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 TCEAL2Q9H3H9 227 aaPredicted RBP16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 FBXO6Q9NRD1 293 aaPredicted RBP16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 EURLQ9NYK6 297 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 PRSS21Q9Y6M0 314 aa16.8■□□□□ 0.28
RPRD1A-209ENST00000590898 NEMP2A6NFY4 417 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 CXorf49A8MYA2 514 aaPredicted RBP16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 PCDHGA12O60330 932 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 POP7O75817 140 aaKnown RBP16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 FTH1P02794 183 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 VCLP18206 1134 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 CCT8P50990 548 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 MPP1Q00013 466 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms