RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 BSNQ9UPA5 3926 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 C2orf81A6NN90 581 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 CCL22O00626 93 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 LDB2O43679 373 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 SRP72O76094 671 aaKnown RBP14.38□□□□□ -0.11
FANCA-220ENST00000566409 STK10O94804 968 aaKnown RBP14.38□□□□□ -0.11
FANCA-220ENST00000566409 VIPP01282 170 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 TYRP1P17643 537 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 CD82P27701 267 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 PPM1FP49593 454 aaPredicted RBP14.38□□□□□ -0.11
FANCA-220ENST00000566409 ZNF140P52738 457 aaPredicted RBP14.38□□□□□ -0.11
FANCA-220ENST00000566409 GPR18Q14330 331 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 NFE2L1Q14494 772 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 PRPSAP1Q14558 356 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 TMEM164Q5U3C3 297 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 ANKS6Q68DC2 871 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 AMZ2Q86W34 360 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 FAM129CQ86XR2 697 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 RNF10Q8N5U6 811 aaKnown RBP14.38□□□□□ -0.11
FANCA-220ENST00000566409 AVL9Q8NBF6 648 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 TTC13Q8NBP0 860 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 NKD1Q969G9 470 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 TTC25Q96NG3 672 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 TMEM121Q9BTD3 319 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 DDA1Q9BW61 102 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 SEMA4CQ9C0C4 833 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 ASB8Q9H765 288 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 SLC39A1Q9NY26 324 aa14.38□□□□□ -0.11
FANCA-220ENST00000566409 MN1Q10571 1320 aaPredicted RBP14.38□□□□□ -0.11
FANCA-220ENST00000566409 TENM4Q6N022 2769 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 GOLGA6L9A6NEM1 432 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 KCNJ13O60928 360 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 UBXN7O94888 489 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 C9P02748 559 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 TPH1P17752 444 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 TMPRSS15P98073 1019 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 MC2RQ01718 297 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 PARP6Q2NL67 630 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 FNBP1LQ5T0N5 605 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 ARHGEF18Q6ZSZ5 1173 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 DET1Q7L5Y6 550 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 TRIM48Q8IWZ4 208 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 GPR150Q8NGU9 434 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 ATG4AQ8WYN0 398 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 RSC1A1Q92681 617 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 CTRCQ99895 268 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 ZCCHC2Q9C0B9 1178 aaKnown RBP14.37□□□□□ -0.11
FANCA-220ENST00000566409 ZMYND15Q9H091 742 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 EPB41L1Q9H4G0 881 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 FAM96AQ9H5X1 160 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 APMAPQ9HDC9 416 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 POT1Q9NUX5 634 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 PSMD13Q9UNM6 376 aa14.37□□□□□ -0.11
FANCA-220ENST00000566409 DNMT3AQ9Y6K1 912 aaPredicted RBP14.37□□□□□ -0.11
FANCA-220ENST00000566409 SPTA1P02549 2419 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 EIF4E1BA6NMX2 242 aaKnown RBP14.36□□□□□ -0.11
FANCA-220ENST00000566409 STMND1H3BQB6 276 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 CRTAMO95727 393 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 VCLP18206 1134 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 MSH3P20585 1137 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 AKT1P31749 480 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 LEPRP48357 1165 aaKnown RBP14.36□□□□□ -0.11
FANCA-220ENST00000566409 CDKN1CP49918 316 aaPredicted RBP14.36□□□□□ -0.11
FANCA-220ENST00000566409 LY6DQ14210 128 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 RPE65Q16518 533 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 MANEAQ5SRI9 462 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 METRNLQ641Q3 311 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 PLXDC1Q8IUK5 500 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 TXLNBQ8N3L3 684 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 ZNF843Q8N446 348 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 TAB3Q8N5C8 712 aaPredicted RBP14.36□□□□□ -0.11
FANCA-220ENST00000566409 CXorf40BQ96DE9 158 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 RTP4Q96DX8 246 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 WBP1Q96G27 269 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 C9orf72Q96LT7 481 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 ASPSCR1Q9BZE9 553 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 FBXO8Q9NRD0 319 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 PIH1D1Q9NWS0 290 aaKnown RBP14.36□□□□□ -0.11
FANCA-220ENST00000566409 SIDT1Q9NXL6 827 aaKnown RBP14.36□□□□□ -0.11
FANCA-220ENST00000566409 GUCA1BQ9UMX6 200 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 PCDHGA4Q9Y5G9 962 aa14.36□□□□□ -0.11
FANCA-220ENST00000566409 CAPN5O15484 640 aaPredicted RBP14.35□□□□□ -0.11
FANCA-220ENST00000566409 KIF1CO43896 1103 aaKnown RBP14.35□□□□□ -0.11
FANCA-220ENST00000566409 PTMAP06454 111 aaKnown RBP14.35□□□□□ -0.11
FANCA-220ENST00000566409 ANKRD34CP0C6C1 535 aa14.35□□□□□ -0.11
FANCA-220ENST00000566409 PRSS56P0CW18 603 aa14.35□□□□□ -0.11
FANCA-220ENST00000566409 PBLDP30039 288 aaPredicted RBP14.35□□□□□ -0.11
FANCA-220ENST00000566409 PPP1CAP62136 330 aa14.35□□□□□ -0.11
FANCA-220ENST00000566409 OASLQ15646 514 aaKnown RBP14.35□□□□□ -0.11
FANCA-220ENST00000566409 LONRF2Q1L5Z9 754 aa14.35□□□□□ -0.11
FANCA-220ENST00000566409 TAF1BQ53T94 588 aaPredicted RBP14.35□□□□□ -0.11
FANCA-220ENST00000566409 DCAF12Q5T6F0 453 aa14.35□□□□□ -0.11
FANCA-220ENST00000566409 TIPARPQ7Z3E1 657 aaKnown RBP14.35□□□□□ -0.11
FANCA-220ENST00000566409 NXPE1Q8N323 547 aa14.35□□□□□ -0.11
FANCA-220ENST00000566409 LILRA3Q8N6C8 439 aaPredicted RBP14.35□□□□□ -0.11
FANCA-220ENST00000566409 CCDC112Q8NEF3 446 aa14.35□□□□□ -0.11
FANCA-220ENST00000566409 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
FANCA-220ENST00000566409 ZNF514Q96K75 400 aaPredicted RBP14.35□□□□□ -0.11
FANCA-220ENST00000566409 DNAJC1Q96KC8 554 aaKnown RBP14.35□□□□□ -0.11
FANCA-220ENST00000566409 TGM7Q96PF1 710 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms