RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 LENG8Q96PV6 779 aaPredicted RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 ADPGKQ9BRR6 497 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 TCEAL7Q9BRU2 100 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 CATSPERBQ9H7T0 1116 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 SNTG1Q9NSN8 517 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 ASF1BQ9NVP2 202 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 ASF1AQ9Y294 204 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 PSMD9O00233 223 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 B4GALT4O60513 344 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 RFPL3O75679 317 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 CYP2C8P10632 490 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 PTPN6P29350 595 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 CD6P30203 668 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 DOC2AQ14183 400 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 RFTN1Q14699 578 aaPredicted RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 FBXO43Q4G163 708 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 SYDE1Q6ZW31 735 aaPredicted RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 EFHBQ8N7U6 833 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 PRELID2Q8N945 189 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 IPMKQ8NFU5 416 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 OR6S1Q8NH40 331 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 NACC1Q96RE7 527 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 NUDT16L1Q9BRJ7 211 aaKnown RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 TMEM39AQ9NV64 488 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 PAK1IP1Q9NWT1 392 aaPredicted RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 ENPP5Q9UJA9 477 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 PCDHGA6Q9Y5G7 932 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 TOPBP1Q92547 1522 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 RRN3P2A6NIE6 340 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 RNMTO43148 476 aaKnown RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 MITFO75030 526 aaPredicted RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 CBX7O95931 251 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 FCGR1AP12314 374 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 ICAM3P32942 547 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 MEP1AQ16819 746 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 FAM98BQ52LJ0 330 aaKnown RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 GLYATQ6IB77 296 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 PDXDC2PQ6P474 469 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 OTOP2Q7RTS6 562 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 R3HCC1LQ7Z5L2 792 aaKnown RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 SLC47A2Q86VL8 602 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 GUF1Q8N442 669 aaKnown RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 MFSD3Q96ES6 412 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 ZNF385DQ9H6B1 395 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 ACTL7BQ9Y614 415 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 SLC28A1O00337 649 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 EFCAB14O75071 495 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 PDE8BO95263 885 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 HK1P19367 917 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 STAT5BP51692 787 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 SNRPEP62304 92 aaKnown RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 SIM2Q14190 667 aaPredicted RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 TOR1AIP1Q5JTV8 583 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 TSPYL5Q86VY4 417 aaPredicted RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 PAQR7Q86WK9 346 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 KIAA0895Q8NCT3 520 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 RNF139Q8WU17 664 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 EXOC2Q96KP1 924 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 EYA3Q99504 573 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 RTKNQ9BST9 563 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 GLS2Q9UI32 602 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 CDH9Q9ULB4 789 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 OAZ3Q9UMX2 235 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 TCOF1Q13428 1488 aaKnown RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 FXYD6-FXYD2A0A087WZ82 144 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 URADA6NGE7 173 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 IFRD1O00458 451 aaPredicted RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 TRAFD1O14545 582 aaPredicted RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 THRBP10828 461 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 CETPP11597 493 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 KLF10Q13118 480 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 CLEC2AQ6UVW9 174 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 PPIL6Q8IXY8 311 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 RFKQ969G6 155 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 SLC2A13Q96QE2 648 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 MAP3K3Q99759 626 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 ADAM19Q9H013 955 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 FXYD6Q9H0Q3 95 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 STOX2Q9P2F5 926 aaPredicted RBP8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 LIMD1Q9UGP4 676 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 PNPLA7Q6ZV29 1317 aa8.91□□□□□ -0.98
GTF2A1-203ENST00000553612 PQBP1O60828 265 aaKnown RBP8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 FGF18O76093 207 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 GSRP00390 522 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 EGFRP00533 1210 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 CNPP09543 421 aaKnown RBP8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 GNA15P30679 374 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 GATMP50440 423 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 MLIPQ5VWP3 458 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 SLX4IPQ5VYV7 408 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 SMIM15Q7Z3B0 74 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 NRARPQ7Z6K4 114 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 LDHDQ86WU2 507 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 CPNE8Q86YQ8 564 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 SLC9A9Q8IVB4 645 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 KCNJ9Q92806 393 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 TP53INP1Q96A56 240 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 PURBQ96QR8 312 aaKnown RBP8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 OR2M4Q96R27 311 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 FAM86C1Q9NVL1 165 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms