RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 ANP32BQ92688 251 aaKnown RBP11.25□□□□□ -0.61
RAB5C-203ENST00000546881 MIB2Q96AX9 1013 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 RNF25Q96BH1 459 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-203ENST00000546881 VPS35Q96QK1 796 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 PANX2Q96RD6 677 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 ACTL8Q9H568 366 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 GLOD4Q9HC38 313 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 LHX9Q9NQ69 397 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 NFKBIL1Q9UBC1 381 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-203ENST00000546881 RARRES3Q9UL19 164 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 TMPRSS11EQ9UL52 423 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 NENFQ9UMX5 172 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 IGHV5-51A0A0C4DH38 117 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 BLACEA4D250 179 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 C3orf70A6NLC5 250 aaPredicted RBP11.24□□□□□ -0.61
RAB5C-203ENST00000546881 OR2AG2A6NM03 316 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 BUD23O43709 281 aaKnown RBP11.24□□□□□ -0.61
RAB5C-203ENST00000546881 POP7O75817 140 aaKnown RBP11.24□□□□□ -0.61
RAB5C-203ENST00000546881 NTRK1P04629 796 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 TMEM253P0C7T8 217 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 EBLN1P0CF75 366 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 FOLR1P15328 257 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 ZFXP17010 805 aaPredicted RBP11.24□□□□□ -0.61
RAB5C-203ENST00000546881 DEKP35659 375 aaKnown RBP11.24□□□□□ -0.61
RAB5C-203ENST00000546881 PMS2P54278 862 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 RPS18P62269 152 aaKnown RBP11.24□□□□□ -0.61
RAB5C-203ENST00000546881 LLGL1Q15334 1064 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 TEX44Q53QW1 395 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 DNTTIP2Q5QJE6 756 aaKnown RBP11.24□□□□□ -0.61
RAB5C-203ENST00000546881 PWWP2BQ6NUJ5 590 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 FAM199XQ6PEV8 388 aaPredicted RBP11.24□□□□□ -0.61
RAB5C-203ENST00000546881 KLHL35Q6PF15 583 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 FAM151BQ6UXP7 276 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 WASH2PQ6VEQ5 465 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 C11orf96Q7Z7L8 435 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 AMZ2Q86W34 360 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 TMTC1Q8IUR5 882 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 CCDC170Q8IYT3 715 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 SLC35G2Q8TBE7 412 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 BRSK1Q8TDC3 778 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 UBXN4Q92575 508 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 OLFM3Q96PB7 478 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 SRPK1Q96SB4 655 aaKnown RBP11.24□□□□□ -0.61
RAB5C-203ENST00000546881 RUFY1Q96T51 708 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 BAG1Q99933 345 aaPredicted RBP11.24□□□□□ -0.61
RAB5C-203ENST00000546881 ZCCHC2Q9C0B9 1178 aaKnown RBP11.24□□□□□ -0.61
RAB5C-203ENST00000546881 WASH6PQ9NQA3 447 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 IMP3Q9NV31 184 aaKnown RBP11.24□□□□□ -0.61
RAB5C-203ENST00000546881 FAM8A1Q9UBU6 413 aa11.24□□□□□ -0.61
RAB5C-203ENST00000546881 CFAP20Q9Y6A4 193 aaKnown RBP11.24□□□□□ -0.61
RAB5C-203ENST00000546881 FLNCQ14315 2725 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 UBA6A0AVT1 1052 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-203ENST00000546881 SOWAHDA6NJG2 315 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 TTLL8A6PVC2 850 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 C21orf140B9A014 251 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 GPR39O43194 453 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 UGT1A9O60656 530 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 PDGFAP04085 211 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 UGT1A6P19224 532 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 NFKB1P19838 968 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 UGT1A1P22309 533 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 UGT1A4P22310 534 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 FECHP22830 423 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 PTPN3P26045 913 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 AKT1P31749 480 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 SPAM1P38567 509 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 MAGEA1P43355 309 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 CHRNA4P43681 627 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 CTSCP53634 463 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 GSDMDP57764 484 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 PDE1BQ01064 536 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 ACY1Q03154 408 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 CHAF1BQ13112 559 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 XRCC4Q13426 336 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 NFE2L1Q14494 772 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 CHRNA6Q15825 494 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 SLC14A2Q15849 920 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 RPE65Q16518 533 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 ASTE1Q2TB18 679 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-203ENST00000546881 KAZNQ674X7 775 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 TMEM220Q6QAJ8 160 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 CERS6Q6ZMG9 384 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 FAM83HQ6ZRV2 1179 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-203ENST00000546881 DET1Q7L5Y6 550 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 EFCAB3Q8N7B9 438 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 RASGEF1AQ8N9B8 481 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 BLOC1S5Q8TDH9 187 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 TADA1Q96BN2 335 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 MAP3K3Q99759 626 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 TRIM55Q9BYV6 548 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 AKIRIN1Q9H9L7 192 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-203ENST00000546881 UGT1A7Q9HAW7 530 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 UGT1A10Q9HAW8 530 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 UGT1A8Q9HAW9 530 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 LRRC4CQ9HCJ2 640 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 IL26Q9NPH9 171 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 KLHL8Q9P2G9 620 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-203ENST00000546881 SAE1Q9UBE0 346 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-203ENST00000546881 EPHA6Q9UF33 1036 aa11.23□□□□□ -0.61
RAB5C-203ENST00000546881 FAM153AQ9UHL3 310 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms