RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 GLP2RO95838 553 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 TYSND1Q2T9J0 566 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 UBXN11Q5T124 520 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 LDB1Q86U70 411 aaPredicted RBP17.55■□□□□ 0.4
NUP54-205ENST00000507257 ADHFE1Q8IWW8 467 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 RYBPQ8N488 228 aaPredicted RBP17.55■□□□□ 0.4
NUP54-205ENST00000507257 CHCHD4Q8N4Q1 142 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 SETD9Q8NE22 299 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 ZNF583Q96ND8 569 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 SMURF2Q9HAU4 748 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 TXNRD2Q9NNW7 524 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 TRPV5Q9NQA5 729 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 SACM1LQ9NTJ5 587 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 ERVW-1Q9UQF0 538 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 NEUROG3Q9Y4Z2 214 aa17.55■□□□□ 0.4
NUP54-205ENST00000507257 A0A1B0GTL3 188 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 LOC285095A0A1B0GVY8 99 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 MYBPHLA2RUH7 354 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 SAGE2PA6NJ88 616 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 SUPT3HB4E1H0 165 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 CD3EAPO15446 510 aaKnown RBP17.54■□□□□ 0.4
NUP54-205ENST00000507257 NUAK1O60285 661 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 CST1P01037 141 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 MMP2P08253 660 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 AGXTP21549 392 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 SERPINB1P30740 379 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 PHC1P78364 1004 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 FADDQ13158 208 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 CDK5R2Q13319 367 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 PLA2G4EQ3MJ16 856 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 PAGE2BQ5JRK9 111 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 GJC2Q5T442 439 aaPredicted RBP17.54■□□□□ 0.4
NUP54-205ENST00000507257 UGT3A1Q6NUS8 523 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 KDELC2Q7Z4H8 507 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 SYVN1Q86TM6 617 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 ADCK1Q86TW2 530 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 P2RY8Q86VZ1 359 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 EID3Q8N140 333 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 KIAA1958Q8N8K9 716 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 OR2T11Q8NH01 316 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 SENP8Q96LD8 212 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 YME1L1Q96TA2 773 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 SIK2Q9H0K1 926 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 RNF39Q9H2S5 420 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 SEMA4BQ9NPR2 832 aaPredicted RBP17.54■□□□□ 0.4
NUP54-205ENST00000507257 PCTPQ9UKL6 214 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 ATP11BQ9Y2G3 1177 aa17.54■□□□□ 0.4
NUP54-205ENST00000507257 MN1Q10571 1320 aaPredicted RBP17.53■□□□□ 0.4
NUP54-205ENST00000507257 PLXNB2O15031 1838 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 SMIM35A0A1B0GVV1 85 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 RGS13O14921 159 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 PRKD3O94806 890 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 SCELO95171 688 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 SLC4A1P02730 911 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 CCR1P32246 355 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 EIF2DP41214 584 aaKnown RBP17.53■□□□□ 0.4
NUP54-205ENST00000507257 CASP2P42575 452 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 CLPPQ16740 277 aaPredicted RBP17.53■□□□□ 0.4
NUP54-205ENST00000507257 ATP6AP1LQ52LC2 224 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 SLC22A16Q86VW1 577 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 RALGPS2Q86X27 583 aaPredicted RBP17.53■□□□□ 0.4
NUP54-205ENST00000507257 TEX26Q8N6G2 289 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 OR56A4Q8NGH8 313 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 TBC1D20Q96BZ9 403 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 NSMCE3Q96MG7 304 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 CAMKK2Q96RR4 588 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 OSMRQ99650 979 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 CARS2Q9HA77 564 aaKnown RBP17.53■□□□□ 0.4
NUP54-205ENST00000507257 NDFIP2Q9NV92 336 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 ZNF225Q9UK10 706 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 RNF112Q9ULX5 631 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 TPRKBQ9Y3C4 175 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 TIMM22Q9Y584 194 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 BPTFQ12830 3046 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 TAF4O00268 1085 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 CYP11A1P05108 521 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 ATXN1LP0C7T5 689 aaKnown RBP17.53■□□□□ 0.4
NUP54-205ENST00000507257 MSH3P20585 1137 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 NR4A1P22736 598 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 NFKBIAP25963 317 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 RABGGTBP53611 331 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 TPTEP56180 551 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 SLC35A2P78381 396 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 PIGFQ07326 219 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 DNASE1L3Q13609 305 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 PGS1Q32NB8 556 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 SIRPB2Q5JXA9 342 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 SLX4IPQ5VYV7 408 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 CTU1Q7Z7A3 348 aaKnown RBP17.53■□□□□ 0.4
NUP54-205ENST00000507257 HIPK1Q86Z02 1210 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 UMODL1-AS1Q8N2C9 162 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 ZNF548Q8NEK5 533 aaPredicted RBP17.53■□□□□ 0.4
NUP54-205ENST00000507257 NDNFQ8TB73 568 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 SLC47A1Q96FL8 570 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 FCRL2Q96LA5 508 aaPredicted RBP17.53■□□□□ 0.4
NUP54-205ENST00000507257 TBATAQ96M53 351 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 DACH2Q96NX9 599 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 ZNF382Q96SR6 550 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 ASPSCR1Q9BZE9 553 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 SLIRPQ9GZT3 109 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms