RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 MYOFQ9NZM1 2061 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 SLC38A8A6NNN8 435 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 UBXN8O00124 270 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 BTN3A1O00481 513 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 GOT2P00505 430 aaKnown RBP12.21□□□□□ -0.45
USP11-206ENST00000469080 HPCAL1P37235 193 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 RGRP47804 291 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 SGSHP51688 502 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 HK2P52789 917 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 RAD23AP54725 363 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 B2MP61769 119 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 PPP1R3AQ16821 1122 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 INAVAQ3KP66 663 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 SIRPB2Q5JXA9 342 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 HECTD3Q5T447 861 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 FAM205BPQ63HN1 556 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 TIGD7Q6NT04 549 aaPredicted RBP12.21□□□□□ -0.45
USP11-206ENST00000469080 FAM171BQ6P995 826 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 ZC3HC1Q86WB0 502 aaKnown RBP12.21□□□□□ -0.45
USP11-206ENST00000469080 CAMK1DQ8IU85 385 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.21□□□□□ -0.45
USP11-206ENST00000469080 NTAN1Q96AB6 310 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 KCNA7Q96RP8 456 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 C11orf84Q9BUA3 381 aaPredicted RBP12.21□□□□□ -0.45
USP11-206ENST00000469080 C1orf50Q9BV19 199 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 POLR1EQ9GZS1 481 aaKnown RBP12.21□□□□□ -0.45
USP11-206ENST00000469080 SCPEP1Q9HB40 452 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 MID1IP1Q9NPA3 183 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 FARSBQ9NSD9 589 aaKnown RBP12.21□□□□□ -0.45
USP11-206ENST00000469080 CD274Q9NZQ7 290 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 Q9Y3F1 56 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 CROCCQ5TZA2 2017 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 CHD7Q9P2D1 2997 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 M0QX08 132 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 MUSKO15146 869 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 ZW10O43264 779 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 ZNF623O75123 536 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 SLC2A3P11169 496 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 SYN1P17600 705 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 KCNA5P22460 613 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 NEDD8Q15843 81 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 PLA2G4EQ3MJ16 856 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 AGAP7PQ5VUJ5 663 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 CADM2Q8N3J6 435 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 DPF3Q92784 378 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 BTN2A3PQ96KV6 586 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 CDK15Q96Q40 435 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 CHID1Q9BWS9 393 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 MROQ9BYG7 248 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 RCOR3Q9P2K3 495 aaPredicted RBP12.21□□□□□ -0.45
USP11-206ENST00000469080 CD84Q9UIB8 345 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 TMCC3Q9ULS5 477 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 AURKCQ9UQB9 309 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 CDYLQ9Y232 598 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 TCAF1Q9Y4C2 921 aa12.21□□□□□ -0.45
USP11-206ENST00000469080 OR1I1O60431 355 aa12.21□□□□□ -0.46
USP11-206ENST00000469080 NAGAP17050 411 aa12.21□□□□□ -0.46
USP11-206ENST00000469080 CFL1P23528 166 aaKnown RBP12.21□□□□□ -0.46
USP11-206ENST00000469080 CLCQ05315 142 aa12.21□□□□□ -0.46
USP11-206ENST00000469080 UGP2Q16851 508 aa12.21□□□□□ -0.46
USP11-206ENST00000469080 STXBP5Q5T5C0 1151 aa12.21□□□□□ -0.46
USP11-206ENST00000469080 LILRB2Q8N423 598 aa12.21□□□□□ -0.46
USP11-206ENST00000469080 PTGR2Q8N8N7 351 aaPredicted RBP12.21□□□□□ -0.46
USP11-206ENST00000469080 SLC9A7Q96T83 725 aa12.21□□□□□ -0.46
USP11-206ENST00000469080 ADNPQ9H2P0 1102 aa12.21□□□□□ -0.46
USP11-206ENST00000469080 RHOJQ9H4E5 214 aa12.21□□□□□ -0.46
USP11-206ENST00000469080 PADI4Q9UM07 663 aa12.21□□□□□ -0.46
USP11-206ENST00000469080 EYSQ5T1H1 3165 aa12.21□□□□□ -0.46
USP11-206ENST00000469080 A0A1W2PRU2 124 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 FAM172BPA6NC97 362 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 CCL16O15467 120 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 DLX3O60479 287 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 MTX2O75431 263 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 MT-ND1P03886 318 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 URODP06132 367 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 CSF2RAP15509 400 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 ITIH1P19827 911 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 CCNCP24863 283 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 XKR4Q5GH76 650 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 MBLAC2Q68D91 279 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 LYPD8Q6UX82 237 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 FRMD7Q6ZUT3 714 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 MILR1Q7Z6M3 343 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 HS6ST3Q8IZP7 471 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 FAM9CQ8IZT9 166 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 BCL7CQ8WUZ0 217 aaPredicted RBP12.2□□□□□ -0.46
USP11-206ENST00000469080 SNX19Q92543 992 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 CIPCQ9C0C6 399 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 CASS4Q9NQ75 786 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 KCNK4Q9NYG8 393 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 FKBPLQ9UIM3 349 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 CDH22Q9UJ99 828 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 DNMT3LQ9UJW3 386 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 RNF112Q9ULX5 631 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 TRAF6Q9Y4K3 522 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 ASCC3Q8N3C0 2202 aaKnown RBP12.2□□□□□ -0.46
USP11-206ENST00000469080 HEATR9A2RTY3 570 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 FFAR3O14843 346 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 GPR42O15529 346 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 SCO1O75880 301 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms