RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 MPOP05164 745 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 BRAFP15056 766 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 IDSP22304 550 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 CCKBRP32239 447 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 INHBCP55103 352 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 PRAMEP78395 509 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 GPLD1P80108 840 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 CYP4F3Q08477 520 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 NFE2L1Q14494 772 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 DBN1Q16643 649 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 AMZ1Q400G9 498 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 ANKRD22Q5VYY1 191 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 LRRC8BQ6P9F7 803 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 FAM83HQ6ZRV2 1179 aaPredicted RBP12.67□□□□□ -0.38
COL5A1-206ENST00000465877 NLRP9Q7RTR0 991 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 TAS2R42Q7RTR8 314 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 TMPRSS9Q7Z410 1059 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 SLC9B2Q86UD5 537 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 SLITRK4Q8IW52 837 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 TRIM48Q8IWZ4 208 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 C17orf53Q8N3J3 647 aaPredicted RBP12.67□□□□□ -0.38
COL5A1-206ENST00000465877 HM13Q8TCT9 377 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 HEXDCQ8WVB3 486 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 CPT1BQ92523 772 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.67□□□□□ -0.38
COL5A1-206ENST00000465877 TMEM74Q96NL1 305 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 SLC38A3Q99624 504 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 EPB41L5Q9HCM4 733 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 KCND1Q9NSA2 647 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 POT1Q9NUX5 634 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 SAR1BQ9Y6B6 198 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 DNMT3AQ9Y6K1 912 aaPredicted RBP12.67□□□□□ -0.38
COL5A1-206ENST00000465877 AK5Q9Y6K8 562 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 CCDC187A0A096LP49 1063 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 PMS2P1A4D2B8 440 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 KLHL33A6NCF5 533 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 LILRA5A6NI73 299 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 OR52A4PA6NMU1 304 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 POP7O75817 140 aaKnown RBP12.66□□□□□ -0.38
COL5A1-206ENST00000465877 GOT2P00505 430 aaKnown RBP12.66□□□□□ -0.38
COL5A1-206ENST00000465877 ATP1B2P14415 290 aaPredicted RBP12.66□□□□□ -0.38
COL5A1-206ENST00000465877 XRCC1P18887 633 aaPredicted RBP12.66□□□□□ -0.38
COL5A1-206ENST00000465877 MGAT1P26572 445 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 HALP42357 657 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 PPM1FP49593 454 aaPredicted RBP12.66□□□□□ -0.38
COL5A1-206ENST00000465877 EPHA4P54764 986 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 ITIH4Q14624 930 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 PPP1R7Q15435 360 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 CLPPQ16740 277 aaPredicted RBP12.66□□□□□ -0.38
COL5A1-206ENST00000465877 PCID2Q5JVF3 399 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 NKAIN2Q5VXU1 208 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 ABRAXAS1Q6UWZ7 409 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 XKR5Q6UX68 686 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 WASH2PQ6VEQ5 465 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 PACS1Q6VY07 963 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 GPR150Q8NGU9 434 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 OR2L2Q8NH16 312 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 HDAC10Q969S8 669 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 LINC00615Q96LM1 132 aaPredicted RBP12.66□□□□□ -0.38
COL5A1-206ENST00000465877 NUDT22Q9BRQ3 303 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 STRADBQ9C0K7 418 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 POLR1BQ9H9Y6 1135 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 WASH6PQ9NQA3 447 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 ZNF624Q9P2J8 865 aaPredicted RBP12.66□□□□□ -0.38
COL5A1-206ENST00000465877 PSMD13Q9UNM6 376 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 WDR37Q9Y2I8 494 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 CACNA1BQ00975 2339 aa12.66□□□□□ -0.38
COL5A1-206ENST00000465877 NBEAQ8NFP9 2946 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 MGAT4DA6NG13 374 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 VIPP01282 170 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 SLC35G4P0C7Q5 338 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 CD1CP29017 333 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 SLC19A1P41440 591 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 NSG1P42857 185 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 SARNPP82979 210 aaKnown RBP12.65□□□□□ -0.38
COL5A1-206ENST00000465877 EIF3IQ13347 325 aaKnown RBP12.65□□□□□ -0.38
COL5A1-206ENST00000465877 PTK6Q13882 451 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 CLCA4Q14CN2 919 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 PHF19Q5T6S3 580 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 CREG2Q8IUH2 290 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 CLDN19Q8N6F1 224 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 OR6P1Q8NGX9 317 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 OR10G6Q8NH81 332 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 WDR36Q8NI36 951 aaKnown RBP12.65□□□□□ -0.38
COL5A1-206ENST00000465877 SLCO2A1Q92959 643 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 SH3KBP1Q96B97 665 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 CXorf40BQ96DE9 158 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 SERPINB12Q96P63 405 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 TBC1D10AQ9BXI6 508 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.65□□□□□ -0.38
COL5A1-206ENST00000465877 COG4Q9H9E3 785 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 VPS37BQ9H9H4 285 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 MRM3Q9HC36 420 aaKnown RBP12.65□□□□□ -0.38
COL5A1-206ENST00000465877 XAB2Q9HCS7 855 aaKnown RBP12.65□□□□□ -0.38
COL5A1-206ENST00000465877 CHRAC1Q9NRG0 131 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 TREX1Q9NSU2 369 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 CATSPERZQ9NTU4 200 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 BFARQ9NZS9 450 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 ASIC3Q9UHC3 531 aa12.65□□□□□ -0.38
COL5A1-206ENST00000465877 TMX2-CTNND1H3BSU7 103 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms