RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 BTG3Q14201 252 aaPredicted RBP11.6□□□□□ -0.55
PDZRN3-203ENST00000462146 FXNQ16595 210 aa11.6□□□□□ -0.55
PDZRN3-203ENST00000462146 IQSEC1Q6DN90 963 aa11.6□□□□□ -0.55
PDZRN3-203ENST00000462146 CD300LGQ6UXG3 332 aa11.6□□□□□ -0.55
PDZRN3-203ENST00000462146 TMEM179BQ7Z7N9 219 aa11.6□□□□□ -0.55
PDZRN3-203ENST00000462146 SH3YL1Q96HL8 342 aaPredicted RBP11.6□□□□□ -0.55
PDZRN3-203ENST00000462146 ABHD8Q96I13 439 aa11.6□□□□□ -0.55
PDZRN3-203ENST00000462146 B3GALT6Q96L58 329 aa11.6□□□□□ -0.55
PDZRN3-203ENST00000462146 NSMCE3Q96MG7 304 aa11.6□□□□□ -0.55
PDZRN3-203ENST00000462146 TDRD1Q9BXT4 1180 aaKnown RBP11.6□□□□□ -0.55
PDZRN3-203ENST00000462146 IKZF5Q9H5V7 419 aa11.6□□□□□ -0.55
PDZRN3-203ENST00000462146 INVSQ9Y283 1065 aa11.6□□□□□ -0.55
PDZRN3-203ENST00000462146 FAM234BA2RU67 622 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 VPS4BO75351 444 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 DEAF1O75398 565 aaPredicted RBP11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 PRSS23O95084 383 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 HMBSP08397 361 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 RAP2AP10114 183 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 UROSP10746 265 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 EIF2B2P49770 351 aaKnown RBP11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 GP2P55259 537 aaKnown RBP11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 LSM3P62310 102 aaKnown RBP11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 CD47Q08722 323 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 SPIDRQ14159 915 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 TRIM16LQ309B1 348 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 SPATS1Q496A3 300 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 RAP1GAP2Q684P5 730 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 SULT1C3Q6IMI6 304 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 MSANTD2Q6P1R3 559 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 ZNF467Q7Z7K2 595 aaPredicted RBP11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 SIDT2Q8NBJ9 832 aaKnown RBP11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 TSPEARQ8WU66 669 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 TADA1Q96BN2 335 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 ZBED2Q9BTP6 218 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 DERL2Q9GZP9 239 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 PALMDQ9NP74 551 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 ADARB2Q9NS39 739 aaKnown RBP11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 SACM1LQ9NTJ5 587 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 VAPAQ9P0L0 249 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 MAGEL2Q9UJ55 1249 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 FBXO10Q9UK96 956 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 TRIM17Q9Y577 477 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 SPO11Q9Y5K1 396 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 CPQQ9Y646 472 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 TRPM7Q96QT4 1865 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 WASH4PA8MWX3 477 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 G3V2T6 193 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 OR1I1O60431 355 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 DFNA5O60443 496 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 NIPSNAP2O75323 286 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 ANXA6P08133 673 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 HPCAL1P37235 193 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 ERVPABLB-1P60509 514 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 KCNAB2Q13303 367 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 PTPRRQ15256 657 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 SKIV2LQ15477 1246 aaKnown RBP11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 ATP6AP1LQ52LC2 224 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 C6orf141Q5SZD1 244 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 LETMD1Q6P1Q0 360 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 TAF2Q6P1X5 1199 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 DNAJC14Q6Y2X3 702 aaPredicted RBP11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 OR10Q1Q8NGQ4 319 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 GPR152Q8TDT2 470 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 ZFP90Q8TF47 636 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 FRS2Q8WU20 508 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 SDCCAG3Q96C92 435 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 CDKN2AIPNLQ96HQ2 116 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 ZYG11BQ9C0D3 744 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 HPS4Q9NQG7 708 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 PDE10AQ9Y233 779 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 POLR3HQ9Y535 204 aaPredicted RBP11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 GPR39O43194 453 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 GGT1P19440 569 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 JAK1P23458 1154 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 HTR7P34969 479 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 RAB15P59190 212 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 FPGSQ05932 587 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 RBM48Q5RL73 367 aaKnown RBP11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 SPESP1Q6UW49 350 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 SCML4Q8N228 414 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 TEX26Q8N6G2 289 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 LEMD2Q8NC56 503 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 GPR150Q8NGU9 434 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 NRBF2Q96F24 287 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 ZNF583Q96ND8 569 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 CGREF1Q99674 301 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 ALOXE3Q9BYJ1 711 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 CCDC90BQ9GZT6 254 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 CCDC68Q9H2F9 335 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 DNMT3BQ9UBC3 853 aaKnown RBP11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 BAG5Q9UL15 447 aa11.59□□□□□ -0.55
PDZRN3-203ENST00000462146 C17orf102A2RUQ5 167 aa11.58□□□□□ -0.56
PDZRN3-203ENST00000462146 LCHNA4D1U4 455 aa11.58□□□□□ -0.56
PDZRN3-203ENST00000462146 E2F3O00716 465 aa11.58□□□□□ -0.56
PDZRN3-203ENST00000462146 XPNPEP2O43895 674 aa11.58□□□□□ -0.56
PDZRN3-203ENST00000462146 CST1P01037 141 aa11.58□□□□□ -0.56
PDZRN3-203ENST00000462146 CHRNB3Q05901 458 aa11.58□□□□□ -0.56
PDZRN3-203ENST00000462146 RAD51Q06609 339 aa11.58□□□□□ -0.56
PDZRN3-203ENST00000462146 EFEMP1Q12805 493 aa11.58□□□□□ -0.56
PDZRN3-203ENST00000462146 PRKG2Q13237 762 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms