RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 WNT9AO14904 365 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 AP1G1O43747 822 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 SNX3O60493 162 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 SNNO75324 88 aaPredicted RBP11.92□□□□□ -0.5
USF1-203ENST00000368021 H2AFYO75367 372 aaKnown RBP11.92□□□□□ -0.5
USF1-203ENST00000368021 SBK3P0C264 359 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 MYL2P10916 166 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 FGF3P11487 239 aaPredicted RBP11.92□□□□□ -0.5
USF1-203ENST00000368021 C5AR1P21730 350 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 KCNA4P22459 653 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 CA5AP35218 305 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 DRD3P35462 400 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 GLRBP48167 497 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 MXRA7P84157 204 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 LRRC32Q14392 662 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 ZNF284Q2VY69 593 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 HSF5Q4G112 596 aaPredicted RBP11.92□□□□□ -0.5
USF1-203ENST00000368021 FBXO43Q4G163 708 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 TECRLQ5HYJ1 363 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 PIP5KL1Q5T9C9 394 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 TSSK4Q6SA08 328 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 FAM47EQ6ZV65 393 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 ZNF765Q7L2R6 523 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 C1orf210Q8IVY1 113 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 NKAPQ8N5F7 415 aaKnown RBP11.92□□□□□ -0.5
USF1-203ENST00000368021 IL17RCQ8NAC3 791 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 OR6Y1Q8NGX8 325 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 OR2T3Q8NH03 318 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 RHEBL1Q8TAI7 183 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 CD200R1Q8TD46 325 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 SCAMP4Q969E2 229 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 DTD2Q96FN9 168 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 SCYL1Q96KG9 808 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 C7orf26Q96N11 449 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 VPS35Q96QK1 796 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 GPR21Q99679 349 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 TSSK1BQ9BXA7 367 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 YIPF3Q9GZM5 350 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 DERL2Q9GZP9 239 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 OXSMQ9NWU1 459 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 ATXN10Q9UBB4 475 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 CD84Q9UIB8 345 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 TRMT6Q9UJA5 497 aaKnown RBP11.92□□□□□ -0.5
USF1-203ENST00000368021 ITM2BQ9Y287 266 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 HCN4Q9Y3Q4 1203 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 CACNA1HO95180 2353 aa11.92□□□□□ -0.5
USF1-203ENST00000368021 NIPSNAP2O75323 286 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 TGDSO95455 350 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 SERPINE1P05121 402 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 CD1DP15813 335 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 GM2AP17900 193 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 CHRM3P20309 590 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 WASP42768 502 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 RPS9P46781 194 aaKnown RBP11.91□□□□□ -0.5
USF1-203ENST00000368021 CLCN7P51798 805 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 BST1Q10588 318 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 CNTN1Q12860 1018 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 ACOX1Q15067 660 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 ZNF776Q68DI1 518 aaPredicted RBP11.91□□□□□ -0.5
USF1-203ENST00000368021 PTRHD1Q6GMV3 140 aaKnown RBP11.91□□□□□ -0.5
USF1-203ENST00000368021 PAQR3Q6TCH7 311 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 OTOAQ7RTW8 1153 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 ISCA2Q86U28 154 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 NLRP8Q86W28 1048 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 SPATA6LQ8N4H0 392 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 RPLP0P6Q8NHW5 317 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 PPP1R14CQ8TAE6 165 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 ERLEC1Q96DZ1 483 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 BOCQ9BWV1 1114 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 ABCG8Q9H221 673 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 MMADHCQ9H3L0 296 aaPredicted RBP11.91□□□□□ -0.5
USF1-203ENST00000368021 LATS2Q9NRM7 1088 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 THAP1Q9NVV9 213 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 KCTD5Q9NXV2 234 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 KLHL42Q9P2K6 505 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 BAIAP2L1Q9UHR4 511 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 TMPRSS11EQ9UL52 423 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 DHRS7Q9Y394 339 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 FADS3Q9Y5Q0 445 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 LRRK1Q38SD2 2015 aa11.91□□□□□ -0.5
USF1-203ENST00000368021 NEMP1O14524 444 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 MID1O15344 667 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 TSPAN6O43657 245 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 TRIM13O60858 407 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 ADAM23O75077 832 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 RALBP11234 206 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 TFEBP19484 476 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 COPAP53621 1224 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 ATP6V0D1P61421 351 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 OCRLQ01968 901 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 DPTQ07507 201 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 ASPHQ12797 758 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 STX3Q13277 289 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 ANGPT1Q15389 498 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 CRY1Q16526 586 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 GPRC6AQ5T6X5 926 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 THEMIS2Q5TEJ8 643 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 AGBL4Q5VU57 503 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 LIPMQ5VYY2 423 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 AADATQ8N5Z0 425 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms