RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 DERAQ9Y315 318 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 FAM92AA1XBS5 289 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 SLC22A2O15244 555 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 ZW10O43264 779 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 IFNA16P05015 189 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 CCNCP24863 283 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 GRIA1P42261 906 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 TAF13Q15543 124 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 ZNHIT3Q15649 155 aaPredicted RBP16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 SLC22A16Q86VW1 577 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 TOP1MTQ969P6 601 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 BTN2A3PQ96KV6 586 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 BIRC8Q96P09 236 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 A0A1B0GVG6 124 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 ZNF99A8MXY4 864 aaPredicted RBP16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 TCF4P15884 667 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 THOP1P52888 689 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 UNC5BQ8IZJ1 945 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 UBE2J2Q8N2K1 259 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 THG1LQ9NWX6 298 aaKnown RBP16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 RAI2Q9Y5P3 530 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 GOLGA4Q13439 2230 aaKnown RBP16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 EI24O14681 340 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 F7P08709 466 aaPredicted RBP16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 UROSP10746 265 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 POU2F1P14859 743 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 STARP49675 285 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 MTPNP58546 118 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 RNASE11Q8TAA1 199 aaKnown RBP16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 XAGE5Q8WWM1 108 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 SOCS4Q8WXH5 440 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 C11orf24Q96F05 449 aaPredicted RBP16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 SLC9A7Q96T83 725 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 PDZD7Q9H5P4 517 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 SEC14L3Q9UDX4 400 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 OR10H1Q9Y4A9 318 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 TFPTP0C1Z6 253 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 CES1P23141 567 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 GPC2Q8N158 579 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 NAT8LQ8N9F0 302 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 ATAD1Q8NBU5 361 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 MTRRQ9UBK8 725 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 EIF2B4Q9UI10 523 aaKnown RBP16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 GIT1Q9Y2X7 761 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 OAS3Q9Y6K5 1087 aaKnown RBP16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 QSOX1O00391 747 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 XRCC1P18887 633 aaPredicted RBP16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 AOC1P19801 751 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 RABGGTBP53611 331 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 TSC22D1Q15714 1073 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 SNAPC1Q16533 368 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 HKDC1Q2TB90 917 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 TXNRD3NBQ6F5E7 133 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 SLC25A24Q6NUK1 477 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 TMPRSS11AQ6ZMR5 421 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 PRR23CQ6ZRP0 262 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 TMEM126BQ8IUX1 230 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 GALNT12Q8IXK2 581 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 SMG8Q8ND04 991 aaKnown RBP16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 SLC35B2Q8TB61 432 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 DCAKDQ8WVC6 231 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 SLCO2A1Q92959 643 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 PPP1R16AQ96I34 528 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 CORO1BQ9BR76 489 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 TTYH1Q9H313 450 aaPredicted RBP16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 MAGEE1Q9HCI5 957 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 MAP4K5Q9Y4K4 846 aa16.29■□□□□ 0.2
SH3RF1-201ENST00000284637 TRAV19A0A0A6YYK7 116 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 KLRG2A4D1S0 409 aaPredicted RBP16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 CXorf49A8MYA2 514 aaPredicted RBP16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 EFNA1P20827 205 aaPredicted RBP16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 OMPP47874 163 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 PIK3R6Q5UE93 754 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 ASRGL1Q7L266 308 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 TMPRSS11BQ86T26 416 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 NMUR1Q9HB89 426 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 DNAJC11Q9NVH1 559 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 MYPNQ86TC9 1320 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 IL1BP01584 269 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 CHRM5P08912 532 aaPredicted RBP16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 MTHFD1P11586 935 aaKnown RBP16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 PLEKHG4Q58EX7 1191 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 TREML2Q5T2D2 321 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 TSTD2Q5T7W7 516 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 MOB2Q70IA6 237 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 C2orf73Q8N5S3 287 aaPredicted RBP16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 STYXQ8WUJ0 223 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 TP53INP1Q96A56 240 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 COPS4Q9BT78 406 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 GMIPQ9P107 970 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 GLYATL1P3A0A0U1RQE8 302 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 TULP3O75386 442 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 DUSP4Q13115 394 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 SPRED3Q2MJR0 410 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 TOR3AQ9H497 397 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 TMEM131LA2VDJ0 1609 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 STX16-NPEPL1H3BU86 382 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 NPHS1O60500 1241 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 SCELO95171 688 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 PGLSO95336 258 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms