RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ATP1B2P14415 290 aaPredicted RBP17■□□□□ 0.31
SHKBP1-212ENST00000596163 ALDH4A1P30038 563 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 CA5AP35218 305 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 HALP42357 657 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 CTSCP53634 463 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 TERF1P54274 439 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 CLDN6P56747 220 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 CCL7P80098 99 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 ACVR1Q04771 509 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 DMPKQ09013 629 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 ITIH4Q14624 930 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 NR1D2Q14995 579 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 FASTKD1Q53R41 847 aaKnown RBP17■□□□□ 0.31
SHKBP1-212ENST00000596163 AGAP9Q5VTM2 703 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 ABRAXAS1Q6UWZ7 409 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 CERS6Q6ZMG9 384 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 DET1Q7L5Y6 550 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 SPRED1Q7Z699 444 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 C11orf96Q7Z7L8 435 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 SFTPA2Q8IWL1 248 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 OR13J1Q8NGT2 312 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 OR4L1Q8NH43 312 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 SLC37A2Q8TED4 501 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 PATE1Q8WXA2 126 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 CPT1BQ92523 772 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 GATA6Q92908 595 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 SGSM3Q96HU1 749 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 LINC00615Q96LM1 132 aaPredicted RBP17■□□□□ 0.31
SHKBP1-212ENST00000596163 SLC38A3Q99624 504 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 MRM3Q9HC36 420 aaKnown RBP17■□□□□ 0.31
SHKBP1-212ENST00000596163 PRDM8Q9NQV8 689 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 CHRAC1Q9NRG0 131 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 ASIC3Q9UHC3 531 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 RABGEF1Q9UJ41 708 aa17■□□□□ 0.31
SHKBP1-212ENST00000596163 GOLGA4Q13439 2230 aaKnown RBP17■□□□□ 0.31
SHKBP1-212ENST00000596163 IGLV3-16A0A075B6K0 115 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 TCRBV7S3A2A0A539 114 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 A6NCN8 305 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 TRABD2BA6NFA1 517 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 CSO75390 466 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 AP2A2O94973 939 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 GSTM1P09488 218 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 XRCC1P18887 633 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 MGAT1P26572 445 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 NSG1P42857 185 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 ARSDP51689 593 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 B4GALNT1Q00973 533 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 GSTM4Q03013 218 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 HHEXQ03014 270 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 ISXQ2M1V0 245 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 AARS2Q5JTZ9 985 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 ZNF449Q6P9G9 518 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 TRIM48Q8IWZ4 208 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 PPIL6Q8IXY8 311 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 OR2L2Q8NH16 312 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 TMEM74Q96NL1 305 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 DPYSL5Q9BPU6 564 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 KIFC1Q9BW19 673 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 NRSN2Q9GZP1 204 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 KCNK4Q9NYG8 393 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 SAMD15Q9P1V8 674 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 ACSL5Q9ULC5 683 aa16.99■□□□□ 0.31
SHKBP1-212ENST00000596163 PRR19A6NJB7 356 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 SDR42E2A6NKP2 422 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 PPM1DO15297 605 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 EML2O95834 649 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 GOT2P00505 430 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 VIPP01282 170 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 FOXN2P32314 431 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 PRLHRP49683 370 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 CDKN1CP49918 316 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 OR1D5P58170 312 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 GPLD1P80108 840 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 CAMK2BQ13554 666 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 PTK6Q13882 451 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 DBN1Q16643 649 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 SYT10Q6XYQ8 523 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 KLHL7Q8IXQ5 586 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 RBM12BQ8IXT5 1001 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 C17orf53Q8N3J3 647 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 NXPE2Q96DL1 559 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 AHCYL2Q96HN2 611 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 STRADBQ9C0K7 418 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 CPNE7Q9UBL6 633 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 SLC2A6Q9UGQ3 507 aa16.98■□□□□ 0.31
SHKBP1-212ENST00000596163 C17orf113A0A1B0GUU1 675 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 A0A1W2PQM1 296 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 C1QTNF9BB2RNN3 333 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 PFDN6O15212 129 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 B4GAT1O43505 415 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 CPNE6O95741 557 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 PROS1P07225 676 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 C1QTNF9P0C862 333 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 PAMP19021 973 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 RPL10P27635 214 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 PPM1FP49593 454 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 DR1Q01658 176 aa16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 DHX34Q14147 1143 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-212ENST00000596163 SEPT7Q16181 437 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms