RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 TRIB3Q96RU7 358 aa20.65■□□□□ 0.9
CHKA-206ENST00000531341 TIMM29Q9BSF4 260 aa20.65■□□□□ 0.9
CHKA-206ENST00000531341 ZSCAN5AQ9BUG6 496 aa20.65■□□□□ 0.9
CHKA-206ENST00000531341 RAB33BQ9H082 229 aa20.65■□□□□ 0.9
CHKA-206ENST00000531341 ING2Q9H160 280 aa20.65■□□□□ 0.9
CHKA-206ENST00000531341 PDE7BQ9NP56 450 aa20.65■□□□□ 0.9
CHKA-206ENST00000531341 CASS4Q9NQ75 786 aa20.65■□□□□ 0.9
CHKA-206ENST00000531341 ANO10Q9NW15 660 aa20.65■□□□□ 0.9
CHKA-206ENST00000531341 IP6K2Q9UHH9 426 aa20.65■□□□□ 0.9
CHKA-206ENST00000531341 RARRES3Q9UL19 164 aa20.65■□□□□ 0.9
CHKA-206ENST00000531341 SHANK1Q9Y566 2161 aa20.65■□□□□ 0.9
CHKA-206ENST00000531341 GPR89AB7ZAQ6 455 aa20.64■□□□□ 0.89
CHKA-206ENST00000531341 KCNK1O00180 336 aa20.64■□□□□ 0.89
CHKA-206ENST00000531341 GPR89BP0CG08 455 aa20.64■□□□□ 0.89
CHKA-206ENST00000531341 GJC1P36383 396 aa20.64■□□□□ 0.89
CHKA-206ENST00000531341 INPP5JQ15735 1006 aaPredicted RBP20.64■□□□□ 0.89
CHKA-206ENST00000531341 CCDC183Q5T5S1 534 aa20.64■□□□□ 0.89
CHKA-206ENST00000531341 AGAP9Q5VTM2 703 aa20.64■□□□□ 0.89
CHKA-206ENST00000531341 FAM69BQ5VUD6 431 aa20.64■□□□□ 0.89
CHKA-206ENST00000531341 SASS6Q6UVJ0 657 aa20.64■□□□□ 0.89
CHKA-206ENST00000531341 WASH2PQ6VEQ5 465 aa20.64■□□□□ 0.89
CHKA-206ENST00000531341 Q8NA96 180 aa20.64■□□□□ 0.89
CHKA-206ENST00000531341 THAP4Q8WY91 577 aa20.64■□□□□ 0.89
CHKA-206ENST00000531341 MAP3K3Q99759 626 aa20.64■□□□□ 0.89
CHKA-206ENST00000531341 CEP41Q9BYV8 373 aa20.64■□□□□ 0.89
CHKA-206ENST00000531341 WASH6PQ9NQA3 447 aa20.64■□□□□ 0.89
CHKA-206ENST00000531341 PCDHGA9Q9Y5G4 932 aaKnown RBP20.64■□□□□ 0.89
CHKA-206ENST00000531341 CDK14O94921 469 aa20.63■□□□□ 0.89
CHKA-206ENST00000531341 BPIP17213 487 aa20.63■□□□□ 0.89
CHKA-206ENST00000531341 IDSP22304 550 aa20.63■□□□□ 0.89
CHKA-206ENST00000531341 DCDC1P59894 354 aa20.63■□□□□ 0.89
CHKA-206ENST00000531341 STX1AQ16623 288 aa20.63■□□□□ 0.89
CHKA-206ENST00000531341 PAPD7Q5XG87 772 aaKnown RBP20.63■□□□□ 0.89
CHKA-206ENST00000531341 LCN10Q6JVE6 187 aa20.63■□□□□ 0.89
CHKA-206ENST00000531341 SLC38A9Q8NBW4 561 aa20.63■□□□□ 0.89
CHKA-206ENST00000531341 CCNYQ8ND76 341 aa20.63■□□□□ 0.89
CHKA-206ENST00000531341 ADGRE3Q9BY15 652 aa20.63■□□□□ 0.89
CHKA-206ENST00000531341 GPR87Q9BY21 358 aa20.63■□□□□ 0.89
CHKA-206ENST00000531341 MFRPQ9BY79 579 aa20.63■□□□□ 0.89
CHKA-206ENST00000531341 ACSS2Q9NR19 701 aa20.63■□□□□ 0.89
CHKA-206ENST00000531341 CUEDC1Q9NWM3 386 aaPredicted RBP20.63■□□□□ 0.89
CHKA-206ENST00000531341 FARSAQ9Y285 508 aaKnown RBP20.63■□□□□ 0.89
CHKA-206ENST00000531341 AURKAO14965 403 aa20.62■□□□□ 0.89
CHKA-206ENST00000531341 CLDN1O95832 211 aa20.62■□□□□ 0.89
CHKA-206ENST00000531341 PTGIRP43119 386 aa20.62■□□□□ 0.89
CHKA-206ENST00000531341 HGSNATQ68CP4 663 aa20.62■□□□□ 0.89
CHKA-206ENST00000531341 SYVN1Q86TM6 617 aa20.62■□□□□ 0.89
CHKA-206ENST00000531341 RBM12BQ8IXT5 1001 aaKnown RBP20.62■□□□□ 0.89
CHKA-206ENST00000531341 KCTD6Q8NC69 237 aa20.62■□□□□ 0.89
CHKA-206ENST00000531341 HDAC11Q96DB2 347 aa20.62■□□□□ 0.89
CHKA-206ENST00000531341 FGF21Q9NSA1 209 aa20.62■□□□□ 0.89
CHKA-206ENST00000531341 NFKBIL1Q9UBC1 381 aaPredicted RBP20.62■□□□□ 0.89
CHKA-206ENST00000531341 ZNF711Q9Y462 761 aa20.62■□□□□ 0.89
CHKA-206ENST00000531341 RP1L1Q8IWN7 2480 aaPredicted RBP20.62■□□□□ 0.89
CHKA-206ENST00000531341 VEGFDO43915 354 aa20.61■□□□□ 0.89
CHKA-206ENST00000531341 FECHP22830 423 aa20.61■□□□□ 0.89
CHKA-206ENST00000531341 CA5AP35218 305 aa20.61■□□□□ 0.89
CHKA-206ENST00000531341 TAS2R40P59535 323 aa20.61■□□□□ 0.89
CHKA-206ENST00000531341 RPS15P62841 145 aaKnown RBP20.61■□□□□ 0.89
CHKA-206ENST00000531341 TMEM115Q12893 351 aaPredicted RBP20.61■□□□□ 0.89
CHKA-206ENST00000531341 GPS2Q13227 327 aa20.61■□□□□ 0.89
CHKA-206ENST00000531341 ATP13A5Q4VNC0 1218 aa20.61■□□□□ 0.89
CHKA-206ENST00000531341 PRAMEF17Q5VTA0 474 aa20.61■□□□□ 0.89
CHKA-206ENST00000531341 JMJD6Q6NYC1 403 aaPredicted RBP20.61■□□□□ 0.89
CHKA-206ENST00000531341 UBXN4Q92575 508 aa20.61■□□□□ 0.89
CHKA-206ENST00000531341 FAF2Q96CS3 445 aa20.61■□□□□ 0.89
CHKA-206ENST00000531341 ZNF514Q96K75 400 aaPredicted RBP20.61■□□□□ 0.89
CHKA-206ENST00000531341 FCRL4Q96PJ5 515 aa20.61■□□□□ 0.89
CHKA-206ENST00000531341 ZNF670Q9BS34 389 aa20.61■□□□□ 0.89
CHKA-206ENST00000531341 MAGEE1Q9HCI5 957 aa20.61■□□□□ 0.89
CHKA-206ENST00000531341 BPIFA1Q9NP55 256 aa20.61■□□□□ 0.89
CHKA-206ENST00000531341 PSMD13Q9UNM6 376 aa20.61■□□□□ 0.89
CHKA-206ENST00000531341 SPO11Q9Y5K1 396 aa20.61■□□□□ 0.89
CHKA-206ENST00000531341 GTF3C3Q9Y5Q9 886 aa20.61■□□□□ 0.89
CHKA-206ENST00000531341 CYP1A2P05177 515 aa20.6■□□□□ 0.89
CHKA-206ENST00000531341 GPR19Q15760 415 aa20.6■□□□□ 0.89
CHKA-206ENST00000531341 PCSK7Q16549 785 aa20.6■□□□□ 0.89
CHKA-206ENST00000531341 PDPK2PQ6A1A2 396 aa20.6■□□□□ 0.89
CHKA-206ENST00000531341 FAM83HQ6ZRV2 1179 aaPredicted RBP20.6■□□□□ 0.89
CHKA-206ENST00000531341 TRAPPC5Q8IUR0 188 aa20.6■□□□□ 0.89
CHKA-206ENST00000531341 FDCSPQ8NFU4 85 aa20.6■□□□□ 0.89
CHKA-206ENST00000531341 PRR7Q8TB68 274 aa20.6■□□□□ 0.89
CHKA-206ENST00000531341 ADAMTS17Q8TE56 1095 aa20.6■□□□□ 0.89
CHKA-206ENST00000531341 MR1Q95460 341 aa20.6■□□□□ 0.89
CHKA-206ENST00000531341 C19orf60Q96EN9 201 aa20.6■□□□□ 0.89
CHKA-206ENST00000531341 TCTN2Q96GX1 697 aa20.6■□□□□ 0.89
CHKA-206ENST00000531341 NAP1L5Q96NT1 182 aaPredicted RBP20.6■□□□□ 0.89
CHKA-206ENST00000531341 NUDT9Q9BW91 350 aa20.6■□□□□ 0.89
CHKA-206ENST00000531341 GPR63Q9BZJ6 419 aa20.6■□□□□ 0.89
CHKA-206ENST00000531341 HAUS2Q9NVX0 235 aa20.6■□□□□ 0.89
CHKA-206ENST00000531341 MED13Q9UHV7 2174 aa20.6■□□□□ 0.89
CHKA-206ENST00000531341 MYO1FO00160 1098 aa20.59■□□□□ 0.89
CHKA-206ENST00000531341 DDX3YO15523 660 aaKnown RBP20.59■□□□□ 0.89
CHKA-206ENST00000531341 CEACAM4O75871 244 aa20.59■□□□□ 0.89
CHKA-206ENST00000531341 LPOP22079 712 aaPredicted RBP20.59■□□□□ 0.89
CHKA-206ENST00000531341 ACY1Q03154 408 aa20.59■□□□□ 0.89
CHKA-206ENST00000531341 CHRNA6Q15825 494 aa20.59■□□□□ 0.89
CHKA-206ENST00000531341 RPE65Q16518 533 aa20.59■□□□□ 0.89
CHKA-206ENST00000531341 HADHQ16836 314 aaKnown RBP20.59■□□□□ 0.89
CHKA-206ENST00000531341 CYB5D1Q6P9G0 228 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms