RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 CDKN1CP49918 316 aaPredicted RBP17.91■□□□□ 0.46
VEGFA-222ENST00000520948 CXADRP78310 365 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 DHX9Q08211 1270 aaKnown RBP17.91■□□□□ 0.46
VEGFA-222ENST00000520948 TMEM115Q12893 351 aaPredicted RBP17.91■□□□□ 0.46
VEGFA-222ENST00000520948 PYCR3Q53H96 274 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 LDLRAP1Q5SW96 308 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 ZNF648Q5T619 568 aaPredicted RBP17.91■□□□□ 0.46
VEGFA-222ENST00000520948 GPRC6AQ5T6X5 926 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 PHYKPLQ8IUZ5 450 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 HID1Q8IV36 788 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 SPACA3Q8IXA5 215 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 CACTIN-AS1Q8N1I8 211 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 APOLD1Q96LR9 279 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 CLPBQ9H078 707 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 FAM96AQ9H5X1 160 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 RMI1Q9H9A7 625 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 CYP4F12Q9HCS2 524 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 ARFGAP3Q9NP61 516 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 SUFUQ9UMX1 484 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 PCYT1BQ9Y5K3 369 aaPredicted RBP17.91■□□□□ 0.46
VEGFA-222ENST00000520948 CSNK1G3Q9Y6M4 447 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 SLC30A1Q9Y6M5 507 aa17.91■□□□□ 0.46
VEGFA-222ENST00000520948 IGLV3-16A0A075B6K0 115 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 ZCWPW2A0A1B0GU75 182 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 OR51F1A6NGY5 319 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 GPR89AB7ZAQ6 455 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 H3BM21 787 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 VEGFDO43915 354 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 OPA1O60313 960 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 ASMTLO95671 621 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 GOT2P00505 430 aaKnown RBP17.9■□□□□ 0.46
VEGFA-222ENST00000520948 GPR89BP0CG08 455 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 PRSS56P0CW18 603 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 CKMT1AP12532 417 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 ZNF8P17098 575 aaPredicted RBP17.9■□□□□ 0.46
VEGFA-222ENST00000520948 ITGALP20701 1170 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 ARCN1P48444 511 aaKnown RBP17.9■□□□□ 0.46
VEGFA-222ENST00000520948 CACNG1Q06432 222 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 CALCOCO2Q13137 446 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 ANKRD20A4Q4UJ75 823 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 DOK6Q6PKX4 331 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 CES3Q6UWW8 571 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 ZDHHC24Q6UX98 284 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 GPR155Q7Z3F1 870 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 RD3Q7Z3Z2 195 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 IGDCC3Q8IVU1 814 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 PIANPQ8IYJ0 282 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 PDIK1LQ8N165 341 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 NXPE1Q8N323 547 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 OR4L1Q8NH43 312 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 ULK4Q96C45 1275 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 EBNA1BP2Q99848 306 aaKnown RBP17.9■□□□□ 0.46
VEGFA-222ENST00000520948 TRIM56Q9BRZ2 755 aaKnown RBP17.9■□□□□ 0.46
VEGFA-222ENST00000520948 LRRC61Q9BV99 259 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 SLC13A1Q9BZW2 595 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 SPASTQ9UBP0 616 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 APOBEC3BQ9UH17 382 aaKnown RBP17.9■□□□□ 0.46
VEGFA-222ENST00000520948 ST14Q9Y5Y6 855 aa17.9■□□□□ 0.46
VEGFA-222ENST00000520948 MTX2O75431 263 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 BANF1O75531 89 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 ALPPL2P10696 532 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 GABREP78334 506 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 B4GALNT1Q00973 533 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 CAV1Q03135 178 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 ZRANB3Q5FWF4 1079 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 CDCP2Q5VXM1 449 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 KIAA0930Q6ICG6 404 aaPredicted RBP17.89■□□□□ 0.45
VEGFA-222ENST00000520948 NRROSQ86YC3 692 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 SDR16C5Q8N3Y7 309 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 LRRN4CLQ8ND94 238 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 ZNF548Q8NEK5 533 aaPredicted RBP17.89■□□□□ 0.45
VEGFA-222ENST00000520948 GPBAR1Q8TDU6 330 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 LRRC39Q96DD0 335 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 DEPDC7Q96QD5 511 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 WDR83Q9BRX9 315 aaKnown RBP17.89■□□□□ 0.45
VEGFA-222ENST00000520948 TMEM168Q9H0V1 697 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 OR2AG1Q9H205 316 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 CARS2Q9HA77 564 aaKnown RBP17.89■□□□□ 0.45
VEGFA-222ENST00000520948 PLAC1Q9HBJ0 212 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 TRNAU1APQ9NX07 287 aaKnown RBP17.89■□□□□ 0.45
VEGFA-222ENST00000520948 NLGN3Q9NZ94 848 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 SAMD15Q9P1V8 674 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 TEX264Q9Y6I9 313 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 FAM169AQ9Y6X4 670 aa17.89■□□□□ 0.45
VEGFA-222ENST00000520948 LY6G6EA0A0G2JKS1 128 aa17.88■□□□□ 0.45
VEGFA-222ENST00000520948 TK2O00142 265 aa17.88■□□□□ 0.45
VEGFA-222ENST00000520948 SCAMP1O15126 338 aa17.88■□□□□ 0.45
VEGFA-222ENST00000520948 AQP9O43315 295 aa17.88■□□□□ 0.45
VEGFA-222ENST00000520948 SGTAO43765 313 aa17.88■□□□□ 0.45
VEGFA-222ENST00000520948 CSO75390 466 aaKnown RBP17.88■□□□□ 0.45
VEGFA-222ENST00000520948 USP1O94782 785 aa17.88■□□□□ 0.45
VEGFA-222ENST00000520948 CDK14O94921 469 aa17.88■□□□□ 0.45
VEGFA-222ENST00000520948 ACRV1P26436 265 aa17.88■□□□□ 0.45
VEGFA-222ENST00000520948 ARL4CP56559 192 aa17.88■□□□□ 0.45
VEGFA-222ENST00000520948 PRAMEP78395 509 aa17.88■□□□□ 0.45
VEGFA-222ENST00000520948 C1orf61Q13536 156 aa17.88■□□□□ 0.45
VEGFA-222ENST00000520948 HIF1AQ16665 826 aa17.88■□□□□ 0.45
VEGFA-222ENST00000520948 BBS9Q3SYG4 887 aa17.88■□□□□ 0.45
VEGFA-222ENST00000520948 DNAJC21Q5F1R6 531 aaKnown RBP17.88■□□□□ 0.45
VEGFA-222ENST00000520948 PRRT3Q5FWE3 981 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms