RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 INTS9Q9NV88 658 aaKnown RBP12.59□□□□□ -0.39
TRAF4-208ENST00000469529 C2orf42Q9NWW7 574 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 DMTF1Q9Y222 760 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 FNDC3AQ9Y2H6 1198 aaKnown RBP12.59□□□□□ -0.39
TRAF4-208ENST00000469529 COQ6Q9Y2Z9 468 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 PRSS21Q9Y6M0 314 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 K7ESM1 405 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 PHGDHO43175 533 aaKnown RBP12.58□□□□□ -0.4
TRAF4-208ENST00000469529 GPR39O43194 453 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 KCNJ13O60928 360 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 SPAG7O75391 227 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 SEMA4FO95754 770 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 F7P08709 466 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-208ENST00000469529 RBP1P09455 135 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 ZNF37AP17032 561 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-208ENST00000469529 CHRM3P20309 590 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 CD6P30203 668 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 PRLHRP49683 370 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 CCR3P51677 355 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 MTAPQ13126 283 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 PDAP1Q13442 181 aaKnown RBP12.58□□□□□ -0.4
TRAF4-208ENST00000469529 LRRC8EQ6NSJ5 796 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 PAQR3Q6TCH7 311 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 TBC1D1Q86TI0 1168 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-208ENST00000469529 ALYREFQ86V81 257 aaKnown RBP12.58□□□□□ -0.4
TRAF4-208ENST00000469529 PLD6Q8N2A8 252 aaKnown RBP12.58□□□□□ -0.4
TRAF4-208ENST00000469529 CLDN19Q8N6F1 224 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 CADM4Q8NFZ8 388 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 MDM1Q8TC05 714 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 CD200R1Q8TD46 325 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 SCARF2Q96GP6 870 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-208ENST00000469529 GPR21Q99679 349 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 MRPL57Q9BQC6 102 aaKnown RBP12.58□□□□□ -0.4
TRAF4-208ENST00000469529 IQCGQ9H095 443 aaKnown RBP12.58□□□□□ -0.4
TRAF4-208ENST00000469529 RMI1Q9H9A7 625 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 PCMTD2Q9NV79 361 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 PSD3Q9NYI0 1048 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 TMEM216Q9P0N5 145 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 EMCNQ9ULC0 261 aa12.58□□□□□ -0.4
TRAF4-208ENST00000469529 RUVBL2Q9Y230 463 aaKnown RBP12.58□□□□□ -0.4
TRAF4-208ENST00000469529 MYLKQ15746 1914 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 K7ESF4 209 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 KLF11O14901 512 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 POLR3GO15318 223 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-208ENST00000469529 SHOX2O60902 331 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-208ENST00000469529 LILRB5O75023 590 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 NIPSNAP2O75323 286 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 GPC4O75487 556 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 CDK14O94921 469 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 TSPAN12O95859 305 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 PROCP04070 461 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 CCDC166P0CW27 439 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 ENO3P13929 434 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-208ENST00000469529 DGKAP23743 735 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 AOAHP28039 575 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 ATP1A2P50993 1020 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 PRKAA2P54646 552 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 IL2P60568 153 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 YPEL5P62699 121 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 CDK3Q00526 305 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 IL9RQ01113 521 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 PLOD1Q02809 727 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-208ENST00000469529 DLG1Q12959 904 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 INPP5AQ14642 412 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 ZNF658BQ4V348 819 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-208ENST00000469529 KHDC1Q4VXA5 237 aaKnown RBP12.57□□□□□ -0.4
TRAF4-208ENST00000469529 PLEKHS1Q5SXH7 462 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 N4BP2L1Q5TBK1 243 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-208ENST00000469529 RAET1GQ6H3X3 334 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 ANO7Q6IWH7 933 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 NEK10Q6ZWH5 1172 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 ADGRG6Q86SQ4 1221 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 ISCA2Q86U28 154 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 PELI3Q8N2H9 469 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 PGBD3Q8N328 593 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 RASGEF1AQ8N9B8 481 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 PLA2G15Q8NCC3 412 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 RAB3IL1Q8TBN0 382 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 ANKRD49Q8WVL7 239 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 CKAP2Q8WWK9 683 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 ATOH1Q92858 354 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-208ENST00000469529 NXNL1Q96CM4 212 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 ERLEC1Q96DZ1 483 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 TSNARE1Q96NA8 513 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 PHOX2BQ99453 314 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 SELENOSQ9BQE4 189 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 CAPS2Q9BXY5 557 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 MBNL1Q9NR56 388 aaKnown RBP12.57□□□□□ -0.4
TRAF4-208ENST00000469529 PHPT1Q9NRX4 125 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-208ENST00000469529 GALPQ9UBC7 116 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 TRMT6Q9UJA5 497 aaKnown RBP12.57□□□□□ -0.4
TRAF4-208ENST00000469529 MID2Q9UJV3 735 aa12.57□□□□□ -0.4
TRAF4-208ENST00000469529 IGHV1OR15-9A0A0B4J2B8 117 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 E5RI56 91 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 NUAK1O60285 661 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 SLCO2B1O94956 709 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 FTH1P02794 183 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 SBK3P0C264 359 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 MYCLP1P12525 358 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-208ENST00000469529 CD1DP15813 335 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms