RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 A8MZ25 164 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 AKR1B15C9JRZ8 316 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 SCAMP1O15126 338 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 NDUFS3O75489 264 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 TSPAN9O75954 239 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 RGS11O94810 467 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 NDUFB4O95168 129 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 FAM107AO95990 144 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 GSTA1P08263 222 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 VIMP08670 466 aaKnown RBP4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 GHRP10912 638 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 ARSBP15848 533 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 ZNF182P17025 639 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 CD58P19256 250 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 GNLYP22749 145 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 TNFRSF8P28908 595 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 CCNHP51946 323 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 ZP1P60852 638 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 MC1RQ01726 317 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 ST3GAL1Q11201 340 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 KLF9Q13886 244 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 WTAPQ15007 396 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 KRT24Q2M2I5 525 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 DUSP28Q4G0W2 176 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 RILPL1Q5EBL4 403 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 CXorf66Q5JRM2 361 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 C6orf141Q5SZD1 244 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 CFAP58Q5T655 872 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 KDM7AQ6ZMT4 941 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 LINGO2Q7L985 606 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 ARHGAP22Q7Z5H3 698 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 TICAM1Q8IUC6 712 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 ADGRF2Q8IZF7 708 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 C7orf57Q8NEG2 295 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 ZNF548Q8NEK5 533 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 B4GALNT2Q8NHY0 566 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 HUS1BQ8NHY5 278 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 FAM81AQ8TBF8 368 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 ZFAND2BQ8WV99 257 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 SGCDQ92629 289 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 ARHGEF26Q96DR7 871 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 BICD1Q96G01 975 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 C1orf74Q96LT6 269 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 TMEM68Q96MH6 324 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 ZNF570Q96NI8 536 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 PRAM1Q96QH2 718 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 TSGA10Q9BZW7 698 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 SPRTNQ9H040 489 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 IQCGQ9H095 443 aaKnown RBP4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 TKTL2Q9H0I9 626 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 VCXQ9H320 206 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 SMARCAD1Q9H4L7 1026 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 KRCC1Q9NPI7 259 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 ADD3Q9UEY8 706 aaKnown RBP4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 C15orf41Q9Y2V0 281 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 NFE2L3Q9Y4A8 694 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 SESN1Q9Y6P5 492 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 ADCY9O60503 1353 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 JCADQ9P266 1359 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 RIMS1Q86UR5 1692 aaKnown RBP4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 USP42Q9H9J4 1324 aaKnown RBP4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 EDC4Q6P2E9 1401 aaKnown RBP4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 MYH6P13533 1939 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 TTC3P53804 2025 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 FAM237AA0A1B0GTK4 181 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 WDR91A4D1P6 747 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 MS4A18H0YCH9 400 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 H0YGN5 161 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 LDB2O43679 373 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 N4BP1O75113 896 aaKnown RBP4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 RTN2O75298 545 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 SLC25A12O75746 678 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 OR2C1O95371 312 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 SYF2O95926 243 aaKnown RBP4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 FGF2P09038 288 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 TNFRSF1BP20333 461 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 FNTAP49354 379 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 ENTPD1P49961 510 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 PLCD1P51178 756 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 PSMD7P51665 324 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 P2RX3P56373 397 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 ADORA2A-AS1P86434 159 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 SPAG1Q07617 926 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 CHAF1BQ13112 559 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 RIPK1Q13546 671 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 PDIA5Q14554 519 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 KCTD2Q14681 263 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 KARSQ15046 597 aaKnown RBP4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 TOMM20Q15388 145 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 ETFDHQ16134 617 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 IMMTQ16891 758 aaKnown RBP4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 CCDC96Q2M329 555 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 PRTGQ2VWP7 1150 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 USP41Q3LFD5 358 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 COLEC12Q5KU26 742 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 GKAP1Q5VSY0 366 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 ADALQ6DHV7 355 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 FBXO46Q6PJ61 603 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 C16orf54Q6UWD8 224 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 QSOX2Q6ZRP7 698 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms