RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TRA2AQ13595 282 aaKnown RBP eCLIP11.03□□□□□ -0.64
RFFL-204ENST00000414419 SEPT6Q14141 434 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 POU6F1Q14863 301 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 OASLQ15646 514 aaKnown RBP11.03□□□□□ -0.64
RFFL-204ENST00000414419 CCNG2Q16589 344 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.03□□□□□ -0.64
RFFL-204ENST00000414419 TMEM164Q5U3C3 297 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 BROXQ5VW32 411 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 KCTD11Q693B1 232 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 DENND5AQ6IQ26 1287 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 PPP1R21Q6ZMI0 780 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 GSTA5Q7RTV2 222 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 ZNF547Q8IVP9 402 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 SLITRK4Q8IW52 837 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 KLHDC8BQ8IXV7 354 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 RASGEF1AQ8N9B8 481 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 DNAAF3Q8N9W5 541 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 OR4D9Q8NGE8 314 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 HEXDCQ8WVB3 486 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 CXorf40BQ96DE9 158 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 RTP4Q96DX8 246 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 PRR11Q96HE9 360 aaPredicted RBP11.03□□□□□ -0.64
RFFL-204ENST00000414419 C19orf43Q9BQ61 176 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 NUDT22Q9BRQ3 303 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 WDR70Q9NW82 654 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 PISDQ9UG56 409 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 ZKSCAN5Q9Y2L8 839 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 KCTD3Q9Y597 815 aa11.03□□□□□ -0.64
RFFL-204ENST00000414419 DNMT3AQ9Y6K1 912 aaPredicted RBP11.03□□□□□ -0.64
RFFL-204ENST00000414419 CFAP47Q6ZTR5 3102 aa11.02□□□□□ -0.64
RFFL-204ENST00000414419 IGHV5-10-1A0A0J9YXX1 117 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 PMS2P1A4D2B8 440 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 A6NCN8 305 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 CDRT15L2A8MXV6 281 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 CFAP99D6REC4 459 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 GAPDHSO14556 408 aaPredicted RBP11.02□□□□□ -0.65
RFFL-204ENST00000414419 HGSO14964 777 aaPredicted RBP11.02□□□□□ -0.65
RFFL-204ENST00000414419 KLK10O43240 276 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 CEP104O60308 925 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 FGGP02679 453 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 HGFP14210 728 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 HOXB3P14651 431 aaPredicted RBP11.02□□□□□ -0.65
RFFL-204ENST00000414419 XRCC1P18887 633 aaPredicted RBP11.02□□□□□ -0.65
RFFL-204ENST00000414419 PBLDP30039 288 aaPredicted RBP11.02□□□□□ -0.65
RFFL-204ENST00000414419 MC4RP32245 332 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 CSTF2P33240 577 aaKnown RBP eCLIP11.02□□□□□ -0.65
RFFL-204ENST00000414419 MAPK10P53779 464 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 EPHA4P54764 986 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 DRG2P55039 364 aaKnown RBP11.02□□□□□ -0.65
RFFL-204ENST00000414419 CDH17Q12864 832 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 MSLNQ13421 630 aaPredicted RBP11.02□□□□□ -0.65
RFFL-204ENST00000414419 LAMB3Q13751 1172 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 GPR33Q49SQ1 333 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 ZRANB3Q5FWF4 1079 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 FNBP1LQ5T0N5 605 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 TMEM71Q6P5X7 295 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 ABRAXAS1Q6UWZ7 409 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 WASH2PQ6VEQ5 465 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 DET1Q7L5Y6 550 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 TAS2R42Q7RTR8 314 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 TMPRSS9Q7Z410 1059 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 SNX20Q7Z614 316 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 SPACA3Q8IXA5 215 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 RCBTB1Q8NDN9 531 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 STYXQ8WUJ0 223 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 NCSTNQ92542 709 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 CCDC74BQ96LY2 380 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 DPH1Q9BZG8 443 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 EPB41L1Q9H4G0 881 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 ETNK1Q9HBU6 452 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 WASH6PQ9NQA3 447 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 RAB6BQ9NRW1 208 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 HOMER3Q9NSC5 361 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 PIH1D1Q9NWS0 290 aaKnown RBP11.02□□□□□ -0.65
RFFL-204ENST00000414419 PAK5Q9P286 719 aa11.02□□□□□ -0.65
RFFL-204ENST00000414419 CHD6Q8TD26 2715 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 KLHL33A6NCF5 533 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 ZSCAN12O43309 604 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 LDB2O43679 373 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 ETS1P14921 441 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 AMD1P17707 334 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 ITIH1P19827 911 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 MPSTP25325 297 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 SLC5A2P31639 672 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 CXCR5P32302 372 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 SLC19A1P41440 591 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 ZNF140P52738 457 aaPredicted RBP11.01□□□□□ -0.65
RFFL-204ENST00000414419 CTSCP53634 463 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 UCNP55089 124 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 XIAPP98170 497 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 C16orf72Q14CZ0 275 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 SKIDA1Q1XH10 827 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 SNAP47Q5SQN1 464 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 AGAP9Q5VTM2 703 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 WDR74Q6RFH5 385 aaPredicted RBP11.01□□□□□ -0.65
RFFL-204ENST00000414419 C4orf22Q6V702 233 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 ZNF574Q6ZN55 896 aaPredicted RBP11.01□□□□□ -0.65
RFFL-204ENST00000414419 TMEM26Q6ZUK4 368 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 C11orf96Q7Z7L8 435 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 CLEC14AQ86T13 490 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms