RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SLC20A1Q8WUM9 679 aa4.33□□□□□ -1.72
CCDC54-201ENST00000261058 SLC44A1Q8WWI5 657 aa4.33□□□□□ -1.72
CCDC54-201ENST00000261058 ANP32BQ92688 251 aaKnown RBP4.33□□□□□ -1.72
CCDC54-201ENST00000261058 TMEM19Q96HH6 336 aa4.33□□□□□ -1.72
CCDC54-201ENST00000261058 MED30Q96HR3 178 aa4.33□□□□□ -1.72
CCDC54-201ENST00000261058 ADGRG7Q96K78 797 aa4.33□□□□□ -1.72
CCDC54-201ENST00000261058 ABHD1Q96SE0 405 aa4.33□□□□□ -1.72
CCDC54-201ENST00000261058 MEIS3Q99687 375 aa4.33□□□□□ -1.72
CCDC54-201ENST00000261058 RTN4RQ9BZR6 473 aa4.33□□□□□ -1.72
CCDC54-201ENST00000261058 ALDH8A1Q9H2A2 487 aaPredicted RBP4.33□□□□□ -1.72
CCDC54-201ENST00000261058 RCC2Q9P258 522 aaKnown RBP4.33□□□□□ -1.72
CCDC54-201ENST00000261058 GAGE2DQ9UEU5 116 aa4.33□□□□□ -1.72
CCDC54-201ENST00000261058 AMACRQ9UHK6 382 aa4.33□□□□□ -1.72
CCDC54-201ENST00000261058 ZNF148Q9UQR1 794 aa4.33□□□□□ -1.72
CCDC54-201ENST00000261058 P4HA2O15460 535 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 CREG1O75629 220 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 ZBTB11O95625 1053 aaPredicted RBP4.32□□□□□ -1.72
CCDC54-201ENST00000261058 AFPP02771 609 aaKnown RBP4.32□□□□□ -1.72
CCDC54-201ENST00000261058 USP8P40818 1118 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 ART1P52961 327 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 CTSCP53634 463 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 FHL1Q13642 323 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 ZNF234Q14588 700 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 SF3B4Q15427 424 aaKnown RBP eCLIP4.32□□□□□ -1.72
CCDC54-201ENST00000261058 KIF19Q2TAC6 998 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 ZNF704Q6ZNC4 412 aaPredicted RBP4.32□□□□□ -1.72
CCDC54-201ENST00000261058 ADIPOR2Q86V24 386 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 GALNT13Q8IUC8 556 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 ADHFE1Q8IWW8 467 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 ODF3L1Q8IXM7 274 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 ZNF441Q8N8Z8 693 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 SYT2Q8N9I0 419 aaPredicted RBP4.32□□□□□ -1.72
CCDC54-201ENST00000261058 GSDMBQ8TAX9 411 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 TMCO6Q96DC7 493 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 TRIM44Q96DX7 344 aaPredicted RBP4.32□□□□□ -1.72
CCDC54-201ENST00000261058 SPATC1LQ9H0A9 340 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 HIPK2Q9H2X6 1198 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 SLCO5A1Q9H2Y9 848 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 DNAJC18Q9H819 358 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 ACAD8Q9UKU7 415 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 B3GALT5Q9Y2C3 310 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 FAM169AQ9Y6X4 670 aa4.32□□□□□ -1.72
CCDC54-201ENST00000261058 PRAG1Q86YV5 1406 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 GPR75-ASB3A0A0A6YYF3 556 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 FAM170AA1A519 330 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 SYNDIG1LA6NDD5 238 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 A8MV72 311 aaPredicted RBP4.31□□□□□ -1.72
CCDC54-201ENST00000261058 NDUFS4O43181 175 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 NR2F2P24468 414 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 ARSEP51690 589 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 SIRPAP78324 504 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 RELQ04864 619 aaPredicted RBP4.31□□□□□ -1.72
CCDC54-201ENST00000261058 ZBTB17Q13105 803 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 NADSYN1Q6IA69 706 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.31□□□□□ -1.72
CCDC54-201ENST00000261058 ASB18Q6ZVZ8 466 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 GUF1Q8N442 669 aaKnown RBP4.31□□□□□ -1.72
CCDC54-201ENST00000261058 UTP15Q8TED0 518 aaKnown RBP4.31□□□□□ -1.72
CCDC54-201ENST00000261058 SLC38A5Q8WUX1 472 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 FIG4Q92562 907 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 GCNAQ96QF7 691 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 DDOQ99489 341 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 SEMA3CQ99985 751 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 HGH1Q9BTY7 390 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 TXLNGYQ9BZA5 131 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 MMP27Q9H306 513 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 KCNK15Q9H427 330 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 RAD21L1Q9H4I0 556 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 LARSQ9P2J5 1176 aaKnown RBP4.31□□□□□ -1.72
CCDC54-201ENST00000261058 CRNNQ9UBG3 495 aaPredicted RBP4.31□□□□□ -1.72
CCDC54-201ENST00000261058 VDAC3Q9Y277 283 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 DLGAP4Q9Y2H0 992 aa4.31□□□□□ -1.72
CCDC54-201ENST00000261058 ZCWPW2A0A1B0GU75 182 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 CTAGE9A4FU28 777 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 MAGEB17A8MXT2 336 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 J3QR06 171 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 TPOP07202 933 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 FAM200BP0CF97 657 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 CTAGE8P0CG41 777 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 T-ENOLP0DO92 83 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 ITGA2P17301 1181 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 CCKARP32238 428 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 MEP1AQ16819 746 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 CCDC92Q53HC0 331 aaPredicted RBP4.3□□□□□ -1.72
CCDC54-201ENST00000261058 LCE1AQ5T7P2 110 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 GPR139Q6DWJ6 353 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 DHRS7BQ6IAN0 325 aaPredicted RBP4.3□□□□□ -1.72
CCDC54-201ENST00000261058 NAA16Q6N069 864 aaPredicted RBP4.3□□□□□ -1.72
CCDC54-201ENST00000261058 RPUSD3Q6P087 351 aaKnown RBP4.3□□□□□ -1.72
CCDC54-201ENST00000261058 PRSS57Q6UWY2 283 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 INTS8Q75QN2 995 aaKnown RBP4.3□□□□□ -1.72
CCDC54-201ENST00000261058 LDB1Q86U70 411 aaPredicted RBP4.3□□□□□ -1.72
CCDC54-201ENST00000261058 TMPRSS12Q86WS5 348 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 MAP7D3Q8IWC1 876 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 CTAGE4Q8IX94 777 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 SLC5A8Q8N695 610 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 NUDCD2Q8WVJ2 157 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 THOC3Q96J01 351 aaKnown RBP4.3□□□□□ -1.72
CCDC54-201ENST00000261058 SYT17Q9BSW7 474 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 CSTL1Q9H114 145 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms