RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 DOK6Q6PKX4 331 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 IGF2-ASQ6U949 168 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 PCGF5Q86SE9 256 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 PRUNE1Q86TP1 453 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 CCNJLQ8IV13 435 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 KLHL7Q8IXQ5 586 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 MNS1Q8NEH6 495 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 SCAMP4Q969E2 229 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 TEX101Q9BY14 249 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 FRMD8Q9BZ67 464 aaPredicted RBP15.52■□□□□ 0.08
USB1-208ENST00000563207 LRIT1Q9P2V4 623 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 NFKBIL1Q9UBC1 381 aaPredicted RBP15.52■□□□□ 0.08
USB1-208ENST00000563207 SUFUQ9UMX1 484 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 SSUH2Q9Y2M2 353 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 TMEM98Q9Y2Y6 226 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 PCYT1BQ9Y5K3 369 aaPredicted RBP15.52■□□□□ 0.08
USB1-208ENST00000563207 MRFAP1Q9Y605 127 aa15.52■□□□□ 0.08
USB1-208ENST00000563207 CFAP46Q8IYW2 2715 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 C2orf81A6NN90 581 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 SMAPO00193 183 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 TNFRSF10CO14798 259 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 PLD2O14939 933 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 MYCLP1P12525 358 aaPredicted RBP15.51■□□□□ 0.07
USB1-208ENST00000563207 TEAD1P28347 426 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 SLC5A2P31639 672 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 ETV5P41161 510 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 GNPDA1P46926 289 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 OR1D5P58170 312 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 DCDC1P59894 354 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 CDK3Q00526 305 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 B4GALNT1Q00973 533 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 CLN3Q13286 438 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 SPARCL1Q14515 664 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 TAF1AQ15573 450 aaPredicted RBP15.51■□□□□ 0.07
USB1-208ENST00000563207 C14orf28Q4W4Y0 310 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 KIAA1614Q5VZ46 1190 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 PPP1R21Q6ZMI0 780 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 RAB11FIP2Q7L804 512 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 LYSMD3Q7Z3D4 306 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 GLT6D1Q7Z4J2 308 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 SPRED1Q7Z699 444 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 DNAAF3Q8N9W5 541 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 DTX3LQ8TDB6 740 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 BLOC1S5Q8TDH9 187 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 GPBAR1Q8TDU6 330 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 KRT12Q99456 494 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 SEMA4CQ9C0C4 833 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 ABCG8Q9H221 673 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 RDH14Q9HBH5 336 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 CASS4Q9NQ75 786 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 SHOC2Q9UQ13 582 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 PKP3Q9Y446 797 aa15.51■□□□□ 0.07
USB1-208ENST00000563207 FAM187AA6NFU0 413 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 PIRTP0C851 137 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 GLB1P16278 677 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 ADCY8P40145 1251 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 VPS41P49754 854 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 INHBCP55103 352 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 TMPRSS3P57727 454 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 MSLNQ13421 630 aaPredicted RBP15.5■□□□□ 0.07
USB1-208ENST00000563207 KCNJ11Q14654 390 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 RAET1GQ6H3X3 334 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 SLC30A9Q6PML9 568 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 CLEC14AQ86T13 490 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 FBXO39Q8N4B4 442 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 ARL14Q8N4G2 192 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 TTC30BQ8N4P2 665 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 TAB3Q8N5C8 712 aaPredicted RBP15.5■□□□□ 0.07
USB1-208ENST00000563207 MCUQ8NE86 351 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 GRAMD1AQ96CP6 724 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 LIN37Q96GY3 246 aaPredicted RBP15.5■□□□□ 0.07
USB1-208ENST00000563207 PLEKHG4BQ96PX9 1271 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 APOL2Q9BQE5 337 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 SEMA6CQ9H3T2 930 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 WDR70Q9NW82 654 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 IL17CQ9P0M4 197 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 ASIC3Q9UHC3 531 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 APPL1Q9UKG1 709 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 SPO11Q9Y5K1 396 aa15.5■□□□□ 0.07
USB1-208ENST00000563207 TEX51A0A1B0GUA7 166 aa15.49■□□□□ 0.07
USB1-208ENST00000563207 ESPNB1AK53 854 aa15.49■□□□□ 0.07
USB1-208ENST00000563207 MLNP12872 115 aa15.49■□□□□ 0.07
USB1-208ENST00000563207 LPOP22079 712 aaPredicted RBP15.49■□□□□ 0.07
USB1-208ENST00000563207 KELP23276 732 aa15.49■□□□□ 0.07
USB1-208ENST00000563207 NPY2RP49146 381 aa15.49■□□□□ 0.07
USB1-208ENST00000563207 CTBSQ01459 385 aa15.49■□□□□ 0.07
USB1-208ENST00000563207 ZFP36L1Q07352 338 aaKnown RBP15.49■□□□□ 0.07
USB1-208ENST00000563207 OLIG2Q13516 323 aa15.49■□□□□ 0.07
USB1-208ENST00000563207 LY6DQ14210 128 aa15.49■□□□□ 0.07
USB1-208ENST00000563207 AMZ1Q400G9 498 aa15.49■□□□□ 0.07
USB1-208ENST00000563207 BROXQ5VW32 411 aa15.49■□□□□ 0.07
USB1-208ENST00000563207 PDPK2PQ6A1A2 396 aa15.49■□□□□ 0.07
USB1-208ENST00000563207 LRRC8BQ6P9F7 803 aa15.49■□□□□ 0.07
USB1-208ENST00000563207 ZNF574Q6ZN55 896 aaPredicted RBP15.49■□□□□ 0.07
USB1-208ENST00000563207 USP53Q70EK8 1073 aa15.49■□□□□ 0.07
USB1-208ENST00000563207 MARK2Q7KZI7 788 aaKnown RBP15.49■□□□□ 0.07
USB1-208ENST00000563207 HOOK3Q86VS8 718 aa15.49■□□□□ 0.07
USB1-208ENST00000563207 JAMLQ86YT9 394 aa15.49■□□□□ 0.07
USB1-208ENST00000563207 PPIL6Q8IXY8 311 aa15.49■□□□□ 0.07
USB1-208ENST00000563207 ZNF843Q8N446 348 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms