RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 SEPT7Q16181 437 aaKnown RBP11.66□□□□□ -0.54
RAB5C-204ENST00000547517 MAP9Q49MG5 647 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 CCDC38Q502W7 563 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 DET1Q7L5Y6 550 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 ZNF438Q7Z4V0 828 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 C17orf82Q86X59 251 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-204ENST00000547517 CACTIN-AS1Q8N1I8 211 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 RASGEF1AQ8N9B8 481 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 KDF1Q8NAX2 398 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-204ENST00000547517 NAT14Q8WUY8 206 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 ATXN7L3BQ96GX2 97 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 TIMM29Q9BSF4 260 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 ZMYND15Q9H091 742 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 LRRN3Q9H3W5 708 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 FAM96AQ9H5X1 160 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 HOMER3Q9NSC5 361 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 SLC23A2Q9UGH3 650 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 ZMIZ1Q9ULJ6 1067 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 ATXN7L1Q9ULK2 861 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-204ENST00000547517 SNX12Q9UMY4 172 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 DRG1Q9Y295 367 aaKnown RBP11.66□□□□□ -0.54
RAB5C-204ENST00000547517 AK5Q9Y6K8 562 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 SLC30A1Q9Y6M5 507 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 RP1P56715 2156 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 ZFC3H1O60293 1989 aaKnown RBP11.66□□□□□ -0.54
RAB5C-204ENST00000547517 ATRXP46100 2492 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 MAP1BP46821 2468 aaKnown RBP11.66□□□□□ -0.54
RAB5C-204ENST00000547517 ARHGEF17Q96PE2 2063 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-204ENST00000547517 A6NCN8 305 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 OR2AG2A6NM03 316 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 PDZK1P1A8MUH7 402 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 ZNF185O15231 689 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 MPOP05164 745 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 F3P13726 295 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 PNLIPP16233 465 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 VCLP18206 1134 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 ALDH4A1P30038 563 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 PPM1FP49593 454 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-204ENST00000547517 TERF1P54274 439 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 OR1D5P58170 312 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 GABREP78334 506 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 CCDC173Q0VFZ6 552 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 TRIP13Q15645 432 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-204ENST00000547517 AMZ1Q400G9 498 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 ZRANB3Q5FWF4 1079 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 C3orf38Q5JPI3 329 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 TTC27Q6P3X3 843 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 B3GNT8Q7Z7M8 397 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 ZNF761Q86XN6 746 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-204ENST00000547517 SFRP1Q8N474 314 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 STYXQ8WUJ0 223 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 MAGOHBQ96A72 148 aaKnown RBP11.65□□□□□ -0.54
RAB5C-204ENST00000547517 ULK4Q96C45 1275 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 NAP1L3Q99457 506 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-204ENST00000547517 FOXP3Q9BZS1 431 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 NRSN2Q9GZP1 204 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 STN1Q9H668 368 aaKnown RBP11.65□□□□□ -0.54
RAB5C-204ENST00000547517 CASS4Q9NQ75 786 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 PRDM8Q9NQV8 689 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 EIF2B3Q9NR50 452 aaKnown RBP11.65□□□□□ -0.54
RAB5C-204ENST00000547517 NLE1Q9NVX2 485 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-204ENST00000547517 TTC7AQ9ULT0 858 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-204ENST00000547517 ENTPD2Q9Y5L3 495 aa11.65□□□□□ -0.54
RAB5C-204ENST00000547517 PPM1DO15297 605 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 BRINP1O60477 761 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 PRSS56P0CW18 603 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 SLC2A4P14672 509 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 FASLGP48023 281 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 CDKN1CP49918 316 aaPredicted RBP11.64□□□□□ -0.55
RAB5C-204ENST00000547517 CLCNKAP51800 687 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 INHBCP55103 352 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 GNG11P61952 73 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 B4GALNT1Q00973 533 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 HHEXQ03014 270 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 COL9A2Q14055 689 aaPredicted RBP11.64□□□□□ -0.55
RAB5C-204ENST00000547517 NR1D2Q14995 579 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 FNBP1LQ5T0N5 605 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 IYDQ6PHW0 289 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 TMEM220Q6QAJ8 160 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 C4orf22Q6V702 233 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 SNX20Q7Z614 316 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 C11orf96Q7Z7L8 435 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 PROSER1Q86XN7 944 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 NXPE1Q8N323 547 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 BEND7Q8N7W2 519 aaPredicted RBP11.64□□□□□ -0.55
RAB5C-204ENST00000547517 CCDC97Q96F63 343 aaPredicted RBP11.64□□□□□ -0.55
RAB5C-204ENST00000547517 DCUN1D1Q96GG9 259 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 SLC38A3Q99624 504 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 C19orf43Q9BQ61 176 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 RDH14Q9HBH5 336 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 EPB41L5Q9HCM4 733 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 KCNK4Q9NYG8 393 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 SCHIP1Q9P0W5 487 aaPredicted RBP11.64□□□□□ -0.55
RAB5C-204ENST00000547517 FAM8A1Q9UBU6 413 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 SATB2Q9UPW6 733 aa11.64□□□□□ -0.55
RAB5C-204ENST00000547517 KIR2DS5A0A0G2JLQ3 304 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 A0A0G2JNG1 304 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 GOLGA6L10A0A0M3HER8 536 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 HEATR9A2RTY3 570 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 PMS2P1A4D2B8 440 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms