RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 MPP5Q8N3R9 675 aa19.19■□□□□ 0.66
DDX55-207ENST00000540763 OR4L1Q8NH43 312 aa19.19■□□□□ 0.66
DDX55-207ENST00000540763 TTC1Q99614 292 aa19.19■□□□□ 0.66
DDX55-207ENST00000540763 COPS8Q99627 209 aa19.19■□□□□ 0.66
DDX55-207ENST00000540763 SUDS3Q9H7L9 328 aaPredicted RBP19.19■□□□□ 0.66
DDX55-207ENST00000540763 ZDHHC3Q9NYG2 299 aa19.19■□□□□ 0.66
DDX55-207ENST00000540763 SNX24Q9Y343 169 aa19.19■□□□□ 0.66
DDX55-207ENST00000540763 DNMT3AQ9Y6K1 912 aaPredicted RBP19.19■□□□□ 0.66
DDX55-207ENST00000540763 KMT2BQ9UMN6 2715 aaPredicted RBP19.19■□□□□ 0.66
DDX55-207ENST00000540763 KLHL33A6NCF5 533 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 ESPNB1AK53 854 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 YY2O15391 372 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 KCNJ13O60928 360 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 MTX2O75431 263 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 AKT1P31749 480 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 CA5AP35218 305 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 PPARGP37231 505 aaPredicted RBP19.18■□□□□ 0.66
DDX55-207ENST00000540763 CLCNKAP51800 687 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 ARL4CP56559 192 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 C1orf61Q13536 156 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 HIF1AQ16665 826 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 PSAPL1Q6NUJ1 521 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 PACS1Q6VY07 963 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 MARK2Q7KZI7 788 aaKnown RBP19.18■□□□□ 0.66
DDX55-207ENST00000540763 SERPINA9Q86WD7 417 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 EID2Q8N6I1 236 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 SEC14L1Q92503 715 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 MFSD3Q96ES6 412 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 STAMBPL1Q96FJ0 436 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 TIMM29Q9BSF4 260 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 BOCQ9BWV1 1114 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 PHACTR1Q9C0D0 580 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 ARFGAP3Q9NP61 516 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 EVA1BQ9NVM1 165 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 FTSJ1Q9UET6 329 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 ZNHIT2Q9UHR6 403 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 DOLKQ9UPQ8 538 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 GPSM3Q9Y4H4 160 aa19.18■□□□□ 0.66
DDX55-207ENST00000540763 TRIM38O00635 465 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 FFAR2O15552 330 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 TTC4O95801 387 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 PGAM1P18669 254 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 KCNA4P22459 653 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 CTBSQ01459 385 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 PROX2Q3B8N5 592 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 BCL7AQ4VC05 210 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 FASTKD1Q53R41 847 aaKnown RBP19.17■□□□□ 0.66
DDX55-207ENST00000540763 FNBP1LQ5T0N5 605 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 ZNF648Q5T619 568 aaPredicted RBP19.17■□□□□ 0.66
DDX55-207ENST00000540763 TAF8Q7Z7C8 310 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 NRROSQ86YC3 692 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 PIANPQ8IYJ0 282 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 AGGF1Q8N302 714 aaeCLIP19.17■□□□□ 0.66
DDX55-207ENST00000540763 RASGEF1AQ8N9B8 481 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 DEFB124Q8NES8 71 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 OR6P1Q8NGX9 317 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 GLMNQ92990 594 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 DCUN1D1Q96GG9 259 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 FAM129AQ9BZQ8 928 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 DPH5Q9H2P9 285 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 CAAP1Q9H8G2 361 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 L2HGDHQ9H9P8 463 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 CATSPERZQ9NTU4 200 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 GRHL1Q9NZI5 618 aa19.17■□□□□ 0.66
DDX55-207ENST00000540763 OR51F1A6NGY5 319 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 E7ESA3 106 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 QSOX1O00391 747 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 TNFSF14O43557 240 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 SIGLEC6O43699 453 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 LDOC1O95751 146 aaPredicted RBP19.16■□□□□ 0.66
DDX55-207ENST00000540763 POLBP06746 335 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 CELA2BP08218 269 aaPredicted RBP19.16■□□□□ 0.66
DDX55-207ENST00000540763 ARNTP27540 789 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 NSG1P42857 185 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 NOVA1P51513 510 aaKnown RBP19.16■□□□□ 0.66
DDX55-207ENST00000540763 MRPS25P82663 173 aaKnown RBP19.16■□□□□ 0.66
DDX55-207ENST00000540763 B4GALNT1Q00973 533 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 DHX9Q08211 1270 aaKnown RBP19.16■□□□□ 0.66
DDX55-207ENST00000540763 DBN1Q16643 649 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 DEFB133Q30KQ1 61 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 ANKRD20A4Q4UJ75 823 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 TAS2R42Q7RTR8 314 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 ZNF547Q8IVP9 402 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 LMNTD2Q8IXW0 634 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 CCL4L1Q8NHW4 92 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 ZNF669Q96BR6 464 aaPredicted RBP19.16■□□□□ 0.66
DDX55-207ENST00000540763 CNDP2Q96KP4 475 aaKnown RBP19.16■□□□□ 0.66
DDX55-207ENST00000540763 LINC00615Q96LM1 132 aaPredicted RBP19.16■□□□□ 0.66
DDX55-207ENST00000540763 CAMK1GQ96NX5 476 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 EBNA1BP2Q99848 306 aaKnown RBP19.16■□□□□ 0.66
DDX55-207ENST00000540763 LRRC1Q9BTT6 524 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 FAM96AQ9H5X1 160 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 PCYT1BQ9Y5K3 369 aaPredicted RBP19.16■□□□□ 0.66
DDX55-207ENST00000540763 MAD1L1Q9Y6D9 718 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 RPS6KL1Q9Y6S9 549 aa19.16■□□□□ 0.66
DDX55-207ENST00000540763 ZCWPW2A0A1B0GU75 182 aa19.15■□□□□ 0.66
DDX55-207ENST00000540763 PRR19A6NJB7 356 aa19.15■□□□□ 0.66
DDX55-207ENST00000540763 BHMG1C9JSJ3 638 aaPredicted RBP19.15■□□□□ 0.66
DDX55-207ENST00000540763 EIF3HO15372 352 aaKnown RBP eCLIP19.15■□□□□ 0.66
DDX55-207ENST00000540763 KRT37O76014 449 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms