RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 RPLP0P05388 317 aaKnown RBP12.72□□□□□ -0.37
COL5A1-206ENST00000465877 F3P13726 295 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 PNLIPP16233 465 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 GRIA1P42261 906 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 FASLGP48023 281 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 CTSCP53634 463 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 BIRC2Q13490 618 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 NR1D2Q14995 579 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 CYP1B1Q16678 543 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 KCTD19Q17RG1 926 aaPredicted RBP12.72□□□□□ -0.37
COL5A1-206ENST00000465877 CCDC38Q502W7 563 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 C4orf22Q6V702 233 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 C11orf96Q7Z7L8 435 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 ARL14Q8N4G2 192 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 MDM1Q8TC05 714 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 ACTRT1Q8TDG2 376 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 STYXQ8WUJ0 223 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 ULK4Q96C45 1275 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 TTC25Q96NG3 672 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 CASS4Q9NQ75 786 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 KLC4Q9NSK0 619 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 LRIT1Q9P2V4 623 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 DNAJC16Q9Y2G8 782 aa12.72□□□□□ -0.37
COL5A1-206ENST00000465877 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.72□□□□□ -0.37
COL5A1-206ENST00000465877 GOLGA6L10A0A0M3HER8 536 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 A0A1W2PQM1 296 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 HEATR9A2RTY3 570 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 MROH6A6NGR9 719 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 PRR19A6NJB7 356 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 OR2AG2A6NM03 316 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 ZNF185O15231 689 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 SNX2O60749 519 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 SLC2A4P14672 509 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 ZNF7P17097 686 aaPredicted RBP12.71□□□□□ -0.37
COL5A1-206ENST00000465877 TCP1P17987 556 aaKnown RBP12.71□□□□□ -0.37
COL5A1-206ENST00000465877 MSH3P20585 1137 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 VPS41P49754 854 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 CLCNKAP51800 687 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 GNG11P61952 73 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 TRIP13Q15645 432 aaPredicted RBP12.71□□□□□ -0.37
COL5A1-206ENST00000465877 ISXQ2M1V0 245 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 MAP9Q49MG5 647 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 CCDC137Q6PK04 289 aaKnown RBP12.71□□□□□ -0.37
COL5A1-206ENST00000465877 MICALCLQ6ZW33 695 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 SNX20Q7Z614 316 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 NXPE1Q8N323 547 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 SFRP1Q8N474 314 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 RASGEF1AQ8N9B8 481 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 Q8N9G6 341 aaPredicted RBP12.71□□□□□ -0.37
COL5A1-206ENST00000465877 MAGOHBQ96A72 148 aaKnown RBP12.71□□□□□ -0.37
COL5A1-206ENST00000465877 GFM1Q96RP9 751 aaKnown RBP12.71□□□□□ -0.37
COL5A1-206ENST00000465877 RANBP9Q96S59 729 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 LRRN3Q9H3W5 708 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 SLC23A2Q9UGH3 650 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 SLC30A1Q9Y6M5 507 aa12.71□□□□□ -0.37
COL5A1-206ENST00000465877 ITPR1Q14643 2758 aa12.71□□□□□ -0.38
COL5A1-206ENST00000465877 APC2O95996 2303 aa12.71□□□□□ -0.38
COL5A1-206ENST00000465877 TRBV5-4A0A0C4DH59 114 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 TRABD2BA6NFA1 517 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 RHPN2P1A8MT19 583 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 PDZK1P1A8MUH7 402 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 PRSS56P0CW18 603 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 VCLP18206 1134 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 TPSB2P20231 275 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 ACRV1P26436 265 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 COILP38432 576 aaPredicted RBP12.7□□□□□ -0.38
COL5A1-206ENST00000465877 FNTAP49354 379 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 CCL7P80098 99 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 B4GALNT1Q00973 533 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 HHEXQ03014 270 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 DMPKQ09013 629 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 TPSAB1Q15661 275 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 SEPT7Q16181 437 aaKnown RBP12.7□□□□□ -0.38
COL5A1-206ENST00000465877 ST3GAL2Q16842 350 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 GPR33Q49SQ1 333 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 DET1Q7L5Y6 550 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 KDF1Q8NAX2 398 aaPredicted RBP12.7□□□□□ -0.38
COL5A1-206ENST00000465877 PPHLN1Q8NEY8 458 aaKnown RBP12.7□□□□□ -0.38
COL5A1-206ENST00000465877 OR13J1Q8NGT2 312 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 CCDC97Q96F63 343 aaPredicted RBP12.7□□□□□ -0.38
COL5A1-206ENST00000465877 NAPGQ99747 312 aaPredicted RBP12.7□□□□□ -0.38
COL5A1-206ENST00000465877 NRSN2Q9GZP1 204 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 FAM96AQ9H5X1 160 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 STN1Q9H668 368 aaKnown RBP12.7□□□□□ -0.38
COL5A1-206ENST00000465877 CCDC86Q9H6F5 360 aaKnown RBP12.7□□□□□ -0.38
COL5A1-206ENST00000465877 SARS2Q9NP81 518 aaKnown RBP12.7□□□□□ -0.38
COL5A1-206ENST00000465877 PRDM8Q9NQV8 689 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 TCAF1Q9Y4C2 921 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 ENTPD2Q9Y5L3 495 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 KNTC1P50748 2209 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 DSPP15924 2871 aaKnown RBP12.7□□□□□ -0.38
COL5A1-206ENST00000465877 ACACAQ13085 2346 aa12.7□□□□□ -0.38
COL5A1-206ENST00000465877 PKD1L2Q7Z442 2459 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.69□□□□□ -0.38
COL5A1-206ENST00000465877 IGLV3-16A0A075B6K0 115 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 KIR2DS5A0A0G2JLQ3 304 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 A0A0G2JNG1 304 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 KIR2DS3K7RE56 304 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 FANCGO15287 622 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 PPM1DO15297 605 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms