RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 VARSP26640 1264 aaKnown RBP17.78■□□□□ 0.44
PHF1-201ENST00000374512 PRKG2Q13237 762 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 TMED1Q13445 227 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 TSNQ15631 228 aaKnown RBP17.78■□□□□ 0.44
PHF1-201ENST00000374512 PAGE3Q5JUK9 113 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 BPIFB1Q8TDL5 484 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 VPS33AQ96AX1 596 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 BIRC7Q96CA5 298 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 HGH1Q9BTY7 390 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 PDFQ9HBH1 243 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 CHCHD3Q9NX63 227 aaKnown RBP17.78■□□□□ 0.44
PHF1-201ENST00000374512 MED16Q9Y2X0 877 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 C9JVG2 144 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 SEC24DO94855 1032 aaPredicted RBP17.78■□□□□ 0.44
PHF1-201ENST00000374512 ALDH1A1P00352 501 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 CDH1P12830 882 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 PMS2P3Q13401 168 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 GALNT3Q14435 633 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 PTPRCAPQ14761 206 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 RAB39AQ14964 217 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 FAM219BQ5XKK7 198 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 SYVN1Q86TM6 617 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 IFNEQ86WN2 208 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 MAGEE2Q8TD90 523 aaPredicted RBP17.78■□□□□ 0.44
PHF1-201ENST00000374512 ISG20Q96AZ6 181 aaKnown RBP17.78■□□□□ 0.44
PHF1-201ENST00000374512 FBXL20Q96IG2 436 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 SLC30A3Q99726 388 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 RPF2Q9H7B2 306 aaKnown RBP17.78■□□□□ 0.44
PHF1-201ENST00000374512 LMCD1Q9NZU5 365 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 ABT1Q9ULW3 272 aaKnown RBP17.78■□□□□ 0.44
PHF1-201ENST00000374512 CDC14AQ9UNH5 594 aa17.78■□□□□ 0.44
PHF1-201ENST00000374512 H3BMQ9 156 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 ARNTLO00327 626 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 VPS26AO75436 327 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 RPL10P27635 214 aaKnown RBP17.77■□□□□ 0.44
PHF1-201ENST00000374512 FMO4P31512 558 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 STT3AP46977 705 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 UFM1P61960 85 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 YBX1P67809 324 aaKnown RBP17.77■□□□□ 0.44
PHF1-201ENST00000374512 TAF1AQ15573 450 aaPredicted RBP17.77■□□□□ 0.44
PHF1-201ENST00000374512 ZNF829Q3KNS6 432 aaPredicted RBP17.77■□□□□ 0.44
PHF1-201ENST00000374512 CLLU1OSQ5K130 101 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 Q6ZNX1 250 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 GPRIN3Q6ZVF9 776 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 SLC24A5Q71RS6 500 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 ZFAND4Q86XD8 727 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 FBXO32Q969P5 355 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 THAP11Q96EK4 314 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 TEX37Q96LM6 180 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 NSMCE2Q96MF7 247 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 COG8Q96MW5 612 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 RDH12Q96NR8 316 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 ZNF382Q96SR6 550 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 MGME1Q9BQP7 344 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 CHID1Q9BWS9 393 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 POLR1BQ9H9Y6 1135 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.77■□□□□ 0.44
PHF1-201ENST00000374512 MARCH2Q9P0N8 246 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 PRG3Q9Y2Y8 225 aaPredicted RBP17.77■□□□□ 0.44
PHF1-201ENST00000374512 TIMM22Q9Y584 194 aa17.77■□□□□ 0.44
PHF1-201ENST00000374512 CENPFP49454 3210 aa17.77■□□□□ 0.43
PHF1-201ENST00000374512 hCG_2014768A0A024R1R8 64 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 A0A1B0GTL3 188 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 MUSKO15146 869 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 NOL3O60936 208 aaKnown RBP17.76■□□□□ 0.43
PHF1-201ENST00000374512 DEAF1O75398 565 aaPredicted RBP17.76■□□□□ 0.43
PHF1-201ENST00000374512 PRSS23O95084 383 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 CPNE6O95741 557 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 TBX18O95935 607 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 C1RP00736 705 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 ALBP02768 609 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 JUNBP17275 347 aaPredicted RBP17.76■□□□□ 0.43
PHF1-201ENST00000374512 KPNA1P52294 538 aaPredicted RBP17.76■□□□□ 0.43
PHF1-201ENST00000374512 CTBSQ01459 385 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 TUBA3CQ13748 450 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 CBX2Q14781 532 aaPredicted RBP17.76■□□□□ 0.43
PHF1-201ENST00000374512 C6orf136Q5SQH8 315 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 VARS2Q5ST30 1063 aaKnown RBP17.76■□□□□ 0.43
PHF1-201ENST00000374512 RTN4RL1Q86UN2 441 aaPredicted RBP17.76■□□□□ 0.43
PHF1-201ENST00000374512 MIB1Q86YT6 1006 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 RIMKLAQ8IXN7 391 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 BORCS5Q969J3 196 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 ITFG2Q969R8 447 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 HEBP1Q9NRV9 189 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 FAIMQ9NVQ4 179 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 FAM50BQ9Y247 325 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 COMMD10Q9Y6G5 202 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 TMEM88BA6NKF7 163 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 C2orf81A6NN90 581 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 SYN3O14994 580 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 ELNP15502 786 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 CES1P23141 567 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 ACVRL1P37023 503 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 ENTPD1P49961 510 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 APLP1P51693 650 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 ATP6AP1LQ52LC2 224 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 KCTD8Q6ZWB6 473 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 ZNF554Q86TJ5 538 aa17.76■□□□□ 0.43
PHF1-201ENST00000374512 FAM193BQ96PV7 902 aaPredicted RBP17.76■□□□□ 0.43
PHF1-201ENST00000374512 GPR21Q99679 349 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms