RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 ANXA8L1Q5VT79 327 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 VANGL1Q8TAA9 524 aaPredicted RBP16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 DMRTB1Q96MA1 342 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 CHCHD6Q9BRQ6 235 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 PCDHAC1Q9H158 963 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 C1orf21Q9H246 121 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 LIN28AQ9H9Z2 209 aaKnown RBP16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 RIPK3Q9Y572 518 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 ARHGEF28Q8N1W1 1705 aaKnown RBP16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 NDUFS2O75306 463 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 GPR1P46091 355 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 NRLP54845 237 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 CYP4F8P98187 520 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 FEM1AQ9BSK4 669 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 ZNF358Q9NW07 568 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 PDE10AQ9Y233 779 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 NR2E3Q9Y5X4 410 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 SMIM28A0A1B0GU29 152 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 SLC25A14O95258 325 aaPredicted RBP16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 PGK1P00558 417 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 OR2B6P58173 313 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 R3HCC1LQ7Z5L2 792 aaKnown RBP16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 GALNT6Q8NCL4 622 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 PCDH19Q8TAB3 1148 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 HEXDCQ8WVB3 486 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 PIK3R3Q92569 461 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 YTHDF1Q9BYJ9 559 aaKnown RBP16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 EHD1Q9H4M9 534 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 DMAC2Q9NW81 257 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 PTBP2Q9UKA9 531 aaKnown RBP16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 ZNF536O15090 1300 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 AP3D1O14617 1153 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 PGRMC2O15173 223 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 S100A6P06703 90 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 CXXC5Q7LFL8 322 aaKnown RBP16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 MON1AQ86VX9 555 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 IPPKQ9H8X2 491 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 INTS7Q9NVH2 962 aaKnown RBP16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 CNTNAP1P78357 1384 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 OR5F1O95221 314 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 CCNYL3P0C7X3 344 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 PPIBP23284 216 aaKnown RBP16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 CD52P31358 61 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 DSC2Q02487 901 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 RNASE12Q5GAN4 147 aaKnown RBP16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 TMEM198Q66K66 360 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 DRICH1Q6PGQ1 229 aaPredicted RBP16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 FAIMQ9NVQ4 179 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 COMMD9Q9P000 198 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 SLC17A6Q9P2U8 582 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 CLEC4AQ9UMR7 237 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 IGLV3-22A0A075B6J6 115 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 A0A1W2PQH9 124 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 IQCF5A8MTL0 148 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 FAM47E-STBD1D6RA91 191 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 AMHP03971 560 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 TNFAIP8L3Q5GJ75 292 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 SH3PXD2AQ5TCZ1 1133 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 BHLHB9Q6PI77 547 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 ZNF607Q96SK3 696 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 PDCD10Q9BUL8 212 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 ST6GALNAC4Q9H4F1 302 aa16.33■□□□□ 0.21
SH3RF1-201ENST00000284637 UNGP13051 313 aaPredicted RBP16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 RPL9P32969 192 aaKnown RBP16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 LCP2Q13094 533 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 SLC9B1Q4ZJI4 515 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 CCDC157Q569K6 752 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 LYPLAL1Q5VWZ2 237 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 ERICH5Q6P6B1 374 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 PRKAB1Q9Y478 270 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 A0A088AWK7 358 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 IQCMA0A1B0GVH7 501 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 C2CD4BA6NLJ0 364 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 SLC22A1O15245 554 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 AP2A2O94973 939 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 YES1P07947 543 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 GNAZP19086 355 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 ZNF10P21506 573 aaPredicted RBP16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 TLX1P31314 330 aaPredicted RBP16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 SUSD6Q92537 303 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 ESAMQ96AP7 390 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 KAT8Q9H7Z6 458 aaKnown RBP16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 SNX7Q9UNH6 387 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 TCAF1Q9Y4C2 921 aa16.33■□□□□ 0.2
SH3RF1-201ENST00000284637 PIP5K1BO14986 540 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 GNG2P59768 71 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 MERTKQ12866 999 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 KLF1Q13351 362 aaPredicted RBP16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 LIN54Q6MZP7 749 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 CLIP3Q96DZ5 547 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 UROC1Q96N76 676 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 KHDRBS3O75525 346 aaKnown RBP16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 HSPA7P48741 367 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 ATXN1P54253 815 aaKnown RBP16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 MANFP55145 182 aaKnown RBP16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 TAS2R39P59534 338 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 ACAP2Q15057 778 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 ANKRD46Q86W74 232 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 OR10A6Q8NH74 314 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 TEFMQ96QE5 360 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms