RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 VBP1P61758 197 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 FXNQ16595 210 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 INTS6LQ5JSJ4 861 aaKnown RBP17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 DENND5AQ6IQ26 1287 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 KLHDC8BQ8IXV7 354 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 ZNF555Q8NEP9 628 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 PSMA8Q8TAA3 256 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 CLSTN3Q9BQT9 956 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 TUBB1Q9H4B7 451 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 I6L893 689 aaPredicted RBP17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 RFPL2O75678 378 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 PCNAP12004 261 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 ALDH7A1P49419 539 aaKnown RBP17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 GALNT13Q8IUC8 556 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 IPMKQ8NFU5 416 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 CALML6Q8TD86 181 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 TSPEARQ8WU66 669 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 WNT8BQ93098 351 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 DACH2Q96NX9 599 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 FICDQ9BVA6 458 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 ARHGAP39Q9C0H5 1083 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 AP5M1Q9H0R1 490 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 TREX1Q9NSU2 369 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 SLAMF8Q9P0V8 285 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 POLG2Q9UHN1 485 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 SLCO3A1Q9UIG8 710 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 STAP1Q9ULZ2 295 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 TESMINQ9Y4I5 508 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 GPR45Q9Y5Y3 372 aa17.54■□□□□ 0.4
CDKN1B-201ENST00000228872 DNAH12Q6ZR08 3092 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 AZIN1O14977 448 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 SEC24AO95486 1093 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 MT-CYBP00156 380 aaPredicted RBP17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 FGF4P08620 206 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 AKR1A1P14550 325 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 DIO3P55073 304 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 KCNK10P57789 538 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 PHC1P78364 1004 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 EMX1Q04741 257 aaPredicted RBP17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 DEFB115Q30KQ5 88 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 GLYATQ6IB77 296 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 RHOXF1Q8NHV9 184 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 SLC2A14Q8TDB8 520 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 DPF3Q92784 378 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 TEX37Q96LM6 180 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 TSPAN18Q96SJ8 248 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 CXCL16Q9H2A7 254 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 TRIT1Q9H3H1 467 aaKnown RBP17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 MID1IP1Q9NPA3 183 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 HAS3O00219 553 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 AOC2O75106 756 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 GUCY1B2O75343 617 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 TULP3O75386 442 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 LRIG2O94898 1065 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 KCNK2O95069 426 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 GRK3P35626 688 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 HERVK_113P63132 956 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 RCAN2Q14206 197 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 KIAA0930Q6ICG6 404 aaPredicted RBP17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 USP43Q70EL4 1123 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 BEND5Q7L4P6 421 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 ARMCX6Q7L4S7 300 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 ZDHHC13Q8IUH4 622 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 LYSMD2Q8IV50 215 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 LGI2Q8N0V4 545 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 ELMOD1Q8N336 334 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 SDCCAG3Q96C92 435 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 CAPNS2Q96L46 248 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 KCNA7Q96RP8 456 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 YME1L1Q96TA2 773 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 ERVK-6Q9BXR3 956 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 CFHR5Q9BXR6 569 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 ABCB10Q9NRK6 738 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 CREBZFQ9NS37 354 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 INTS7Q9NVH2 962 aaKnown RBP17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 BTRCQ9Y297 605 aa17.53■□□□□ 0.4
CDKN1B-201ENST00000228872 ISPDA4D126 451 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 DYRK3O43781 588 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 CACNG3O60359 315 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 EEDO75530 441 aaKnown RBP17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 UPK1BO75841 260 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 GSNP06396 782 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 LINC00032P0C843 101 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 PAMP19021 973 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 MTHFRP42898 656 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 ZFP36L2P47974 494 aaKnown RBP17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 CLCN5P51795 746 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 KCNAB2Q13303 367 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 SLC14A2Q15849 920 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 KYAT1Q16773 422 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 KANK2Q63ZY3 851 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 RNF19BQ6ZMZ0 732 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 PJA1Q8NG27 643 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 YIPF6Q96EC8 236 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 TSPAN17Q96FV3 270 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 CEP44Q9C0F1 390 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 DSN1Q9H410 356 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 NEK6Q9HC98 313 aa17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 AAR2Q9Y312 384 aaKnown RBP17.52■□□□□ 0.4
CDKN1B-201ENST00000228872 SCN1AP35498 2009 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms