RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 CHRNGP07510 517 aa17.94■□□□□ 0.46
VIM-201ENST00000224237 ADRB3P13945 408 aa17.94■□□□□ 0.46
VIM-201ENST00000224237 ALOX15P16050 662 aaPredicted RBP17.94■□□□□ 0.46
VIM-201ENST00000224237 TNFRSF4P43489 277 aa17.94■□□□□ 0.46
VIM-201ENST00000224237 GALK1P51570 392 aa17.94■□□□□ 0.46
VIM-201ENST00000224237 ZNF284Q2VY69 593 aa17.94■□□□□ 0.46
VIM-201ENST00000224237 GALNTL6Q49A17 601 aa17.94■□□□□ 0.46
VIM-201ENST00000224237 GPRC6AQ5T6X5 926 aa17.94■□□□□ 0.46
VIM-201ENST00000224237 FAM46CQ5VWP2 391 aa17.94■□□□□ 0.46
VIM-201ENST00000224237 MMAAQ8IVH4 418 aaKnown RBP17.94■□□□□ 0.46
VIM-201ENST00000224237 CHPFQ8IZ52 775 aa17.94■□□□□ 0.46
VIM-201ENST00000224237 NRSN1Q8IZ57 195 aa17.94■□□□□ 0.46
VIM-201ENST00000224237 ZNF513Q8N8E2 541 aaPredicted RBP17.94■□□□□ 0.46
VIM-201ENST00000224237 EEF1AKMT1Q8WVE0 214 aa17.94■□□□□ 0.46
VIM-201ENST00000224237 SCAMP4Q969E2 229 aa17.94■□□□□ 0.46
VIM-201ENST00000224237 PDLIM5Q96HC4 596 aaKnown RBP17.94■□□□□ 0.46
VIM-201ENST00000224237 PANX3Q96QZ0 392 aa17.94■□□□□ 0.46
VIM-201ENST00000224237 GAS2L1Q99501 681 aaPredicted RBP17.94■□□□□ 0.46
VIM-201ENST00000224237 HEY2Q9UBP5 337 aa17.94■□□□□ 0.46
VIM-201ENST00000224237 ITM2BQ9Y287 266 aa17.94■□□□□ 0.46
VIM-201ENST00000224237 STON1Q9Y6Q2 735 aa17.94■□□□□ 0.46
VIM-201ENST00000224237 C2CD4DB7Z1M9 353 aa17.93■□□□□ 0.46
VIM-201ENST00000224237 BTN3A1O00481 513 aa17.93■□□□□ 0.46
VIM-201ENST00000224237 AREL1O15033 823 aa17.93■□□□□ 0.46
VIM-201ENST00000224237 FSBPO95073 299 aa17.93■□□□□ 0.46
VIM-201ENST00000224237 SLC25A14O95258 325 aaPredicted RBP17.93■□□□□ 0.46
VIM-201ENST00000224237 IMPDH1P20839 514 aa17.93■□□□□ 0.46
VIM-201ENST00000224237 RGS4P49798 205 aa17.93■□□□□ 0.46
VIM-201ENST00000224237 ACOX1Q15067 660 aa17.93■□□□□ 0.46
VIM-201ENST00000224237 TSNQ15631 228 aaKnown RBP17.93■□□□□ 0.46
VIM-201ENST00000224237 SPDYAQ5MJ70 313 aa17.93■□□□□ 0.46
VIM-201ENST00000224237 ERN2Q76MJ5 926 aaKnown RBP17.93■□□□□ 0.46
VIM-201ENST00000224237 EXT2Q93063 718 aa17.93■□□□□ 0.46
VIM-201ENST00000224237 SKA1Q96BD8 255 aa17.93■□□□□ 0.46
VIM-201ENST00000224237 L3HYPDHQ96EM0 354 aa17.93■□□□□ 0.46
VIM-201ENST00000224237 MOCOSQ96EN8 888 aa17.93■□□□□ 0.46
VIM-201ENST00000224237 MYLK2Q9H1R3 596 aa17.93■□□□□ 0.46
VIM-201ENST00000224237 ACTR5Q9H9F9 607 aaPredicted RBP17.93■□□□□ 0.46
VIM-201ENST00000224237 ZFP69BQ9UJL9 534 aa17.93■□□□□ 0.46
VIM-201ENST00000224237 SLC12A4Q9UP95 1085 aa17.93■□□□□ 0.46
VIM-201ENST00000224237 NPEPPSL1A6NEC2 478 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 WNT9AO14904 365 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 SPINT1O43278 529 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 TRIM16O95361 564 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 OR56A5P0C7T3 313 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 MTHFD2P13995 350 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 SERPINB3P29508 390 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 LIG3P49916 1009 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 B4GALNT1Q00973 533 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 ZBTB16Q05516 673 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 GALNT1Q10472 559 aaPredicted RBP17.92■□□□□ 0.46
VIM-201ENST00000224237 CRY1Q16526 586 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 SPRED3Q2MJR0 410 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 HSF5Q4G112 596 aaPredicted RBP17.92■□□□□ 0.46
VIM-201ENST00000224237 CYP2U1Q7Z449 544 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 RAB44Q7Z6P3 723 aaPredicted RBP17.92■□□□□ 0.46
VIM-201ENST00000224237 MTDHQ86UE4 582 aaKnown RBP17.92■□□□□ 0.46
VIM-201ENST00000224237 LKAAEAR1Q8TD35 194 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 HDAC8Q9BY41 377 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 ACSS2Q9NR19 701 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 LATS2Q9NRM7 1088 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 SPATS2LQ9NUQ6 558 aaKnown RBP17.92■□□□□ 0.46
VIM-201ENST00000224237 DNAJC28Q9NX36 388 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 TMPRSS11EQ9UL52 423 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.92■□□□□ 0.46
VIM-201ENST00000224237 F5P12259 2224 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 ATG2BQ96BY7 2078 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 CFAP99D6REC4 459 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 UBXN8O00124 270 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 CDC7O00311 574 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 MAGEC1O60732 1142 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 GFAPP14136 432 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 DGKAP23743 735 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 AKT1P31749 480 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 WASP42768 502 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 PSMD8P48556 350 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 RPL14P50914 215 aaKnown RBP17.92■□□□□ 0.46
VIM-201ENST00000224237 HERVK_113P63132 956 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 TTLL9Q3SXZ7 439 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 ZNF678Q5SXM1 525 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 TXNDC11Q6PKC3 985 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 LSMEM2Q8N112 164 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 ZBTB2Q8N680 514 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 NAT14Q8WUY8 206 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 EZH1Q92800 747 aaPredicted RBP17.92■□□□□ 0.46
VIM-201ENST00000224237 FUBP1Q96AE4 644 aaKnown RBP17.92■□□□□ 0.46
VIM-201ENST00000224237 RAB7BQ96AH8 199 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 DTD2Q96FN9 168 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 DCUN1D1Q96GG9 259 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 VPS35Q96QK1 796 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 TRMOQ9BU70 441 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 WRAP53Q9BUR4 548 aaKnown RBP17.92■□□□□ 0.46
VIM-201ENST00000224237 RIOK2Q9BVS4 552 aaKnown RBP17.92■□□□□ 0.46
VIM-201ENST00000224237 ERVK-6Q9BXR3 956 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 EML4Q9HC35 981 aaKnown RBP17.92■□□□□ 0.46
VIM-201ENST00000224237 KLHL42Q9P2K6 505 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 IKZF3Q9UKT9 509 aa17.92■□□□□ 0.46
VIM-201ENST00000224237 SUPT3HB4E1H0 165 aa17.91■□□□□ 0.46
VIM-201ENST00000224237 SLCO1B7G3V0H7 640 aa17.91■□□□□ 0.46
VIM-201ENST00000224237 K7EQS6 105 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms