RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 RGPD5Q99666 1765 aa23.44■■□□□ 1.34
SNAPC3-207ENST00000610884 VAMP4O75379 141 aa23.43■■□□□ 1.34
SNAPC3-207ENST00000610884 HAP1P54257 671 aaPredicted RBP23.43■■□□□ 1.34
SNAPC3-207ENST00000610884 IL17REQ8NFR9 667 aa23.43■■□□□ 1.34
SNAPC3-207ENST00000610884 PXDNQ92626 1479 aa23.43■■□□□ 1.34
SNAPC3-207ENST00000610884 LMOD3Q0VAK6 560 aa23.43■■□□□ 1.34
SNAPC3-207ENST00000610884 KIAA0232Q92628 1395 aa23.43■■□□□ 1.34
SNAPC3-207ENST00000610884 KIF1AQ12756 1690 aa23.42■■□□□ 1.34
SNAPC3-207ENST00000610884 CSB-PGBD3P0DP91 1061 aa23.42■■□□□ 1.34
SNAPC3-207ENST00000610884 TWISTNBQ3B726 338 aaPredicted RBP23.42■■□□□ 1.34
SNAPC3-207ENST00000610884 NECTIN2Q92692 538 aa23.41■■□□□ 1.34
SNAPC3-207ENST00000610884 TNS3Q68CZ2 1445 aa23.41■■□□□ 1.34
SNAPC3-207ENST00000610884 MPRIPQ6WCQ1 1025 aa23.4■■□□□ 1.34
SNAPC3-207ENST00000610884 ALS2Q96Q42 1657 aa23.4■■□□□ 1.34
SNAPC3-207ENST00000610884 GNAT3A8MTJ3 354 aa23.4■■□□□ 1.34
SNAPC3-207ENST00000610884 TRIM27P14373 513 aa23.4■■□□□ 1.34
SNAPC3-207ENST00000610884 SLIT3O75094 1523 aa23.39■■□□□ 1.34
SNAPC3-207ENST00000610884 RTL1A6NKG5 1358 aa23.39■■□□□ 1.33
SNAPC3-207ENST00000610884 USP54Q70EL1 1684 aa23.39■■□□□ 1.33
SNAPC3-207ENST00000610884 ERBB3P21860 1342 aa23.38■■□□□ 1.33
SNAPC3-207ENST00000610884 GAS2L2Q8NHY3 880 aa23.38■■□□□ 1.33
SNAPC3-207ENST00000610884 KIF24Q5T7B8 1368 aa23.38■■□□□ 1.33
SNAPC3-207ENST00000610884 CHL1O00533 1208 aa23.38■■□□□ 1.33
SNAPC3-207ENST00000610884 TSPYL4Q9UJ04 414 aa23.38■■□□□ 1.33
SNAPC3-207ENST00000610884 CALD1Q05682 793 aaKnown RBP23.37■■□□□ 1.33
SNAPC3-207ENST00000610884 PIP4K2BP78356 416 aa23.37■■□□□ 1.33
SNAPC3-207ENST00000610884 SOS2Q07890 1332 aaPredicted RBP23.36■■□□□ 1.33
SNAPC3-207ENST00000610884 ZKSCAN2Q63HK3 967 aa23.36■■□□□ 1.33
SNAPC3-207ENST00000610884 ZNF530Q6P9A1 599 aaPredicted RBP23.36■■□□□ 1.33
SNAPC3-207ENST00000610884 FTSJ3Q8IY81 847 aaKnown RBP23.36■■□□□ 1.33
SNAPC3-207ENST00000610884 PRDM11Q9NQV5 511 aa23.36■■□□□ 1.33
SNAPC3-207ENST00000610884 USP35Q9P2H5 1018 aa23.36■■□□□ 1.33
SNAPC3-207ENST00000610884 CRB1P82279 1406 aa23.36■■□□□ 1.33
SNAPC3-207ENST00000610884 STRN4Q9NRL3 753 aa23.34■■□□□ 1.33
SNAPC3-207ENST00000610884 IGHDP01880 384 aa23.34■■□□□ 1.33
SNAPC3-207ENST00000610884 PDE3AQ14432 1141 aa23.34■■□□□ 1.33
SNAPC3-207ENST00000610884 KCNQ3O43525 872 aa23.33■■□□□ 1.32
SNAPC3-207ENST00000610884 DZIP1LQ8IYY4 767 aaKnown RBP23.33■■□□□ 1.32
SNAPC3-207ENST00000610884 ITPRIPQ8IWB1 547 aa23.32■■□□□ 1.32
SNAPC3-207ENST00000610884 TMEM57Q8N5G2 664 aa23.32■■□□□ 1.32
SNAPC3-207ENST00000610884 ATF7IPQ6VMQ6 1270 aa23.31■■□□□ 1.32
SNAPC3-207ENST00000610884 MAP3K5Q99683 1374 aa23.31■■□□□ 1.32
SNAPC3-207ENST00000610884 MRPL50Q8N5N7 158 aaKnown RBP23.31■■□□□ 1.32
SNAPC3-207ENST00000610884 PCDHB15Q9Y5E8 787 aa23.3■■□□□ 1.32
SNAPC3-207ENST00000610884 CT47B1P0C2W7 299 aaPredicted RBP23.27■■□□□ 1.32
SNAPC3-207ENST00000610884 PLEKHO1Q53GL0 409 aaPredicted RBP23.27■■□□□ 1.32
SNAPC3-207ENST00000610884 RAPGEF4Q8WZA2 1011 aa23.26■■□□□ 1.31
SNAPC3-207ENST00000610884 PHRF1Q9P1Y6 1649 aaKnown RBP23.26■■□□□ 1.31
SNAPC3-207ENST00000610884 MVPQ14764 893 aaKnown RBP23.26■■□□□ 1.31
SNAPC3-207ENST00000610884 TOM1L2Q6ZVM7 507 aa23.26■■□□□ 1.31
SNAPC3-207ENST00000610884 G2E3Q7L622 706 aa23.25■■□□□ 1.31
SNAPC3-207ENST00000610884 SLC4A2P04920 1241 aa23.25■■□□□ 1.31
SNAPC3-207ENST00000610884 TAF7Q15545 349 aaPredicted RBP23.24■■□□□ 1.31
SNAPC3-207ENST00000610884 ALDH1L2Q3SY69 923 aa23.24■■□□□ 1.31
SNAPC3-207ENST00000610884 C1orf141Q5JVX7 400 aa23.24■■□□□ 1.31
SNAPC3-207ENST00000610884 LARP1Q6PKG0 1096 aaKnown RBP23.24■■□□□ 1.31
SNAPC3-207ENST00000610884 C1orf115Q9H7X2 142 aa23.24■■□□□ 1.31
SNAPC3-207ENST00000610884 EIF2S2P20042 333 aaKnown RBP23.22■■□□□ 1.31
SNAPC3-207ENST00000610884 PRAMEF22A3QJZ6 481 aa23.22■■□□□ 1.31
SNAPC3-207ENST00000610884 AKAP4Q5JQC9 854 aa23.22■■□□□ 1.31
SNAPC3-207ENST00000610884 KDM2BQ8NHM5 1336 aa23.21■■□□□ 1.31
SNAPC3-207ENST00000610884 CAMTA1Q9Y6Y1 1673 aa23.21■■□□□ 1.31
SNAPC3-207ENST00000610884 TEFQ10587 303 aa23.21■■□□□ 1.31
SNAPC3-207ENST00000610884 MEGF6O75095 1541 aa23.21■■□□□ 1.31
SNAPC3-207ENST00000610884 ADAMTS2O95450 1211 aa23.21■■□□□ 1.31
SNAPC3-207ENST00000610884 EVA1CP58658 441 aa23.21■■□□□ 1.31
SNAPC3-207ENST00000610884 SLC39A6Q13433 755 aa23.21■■□□□ 1.31
SNAPC3-207ENST00000610884 F6X3S4 739 aa23.2■■□□□ 1.3
SNAPC3-207ENST00000610884 RGS3P49796 1198 aa23.2■■□□□ 1.3
SNAPC3-207ENST00000610884 COL18A1P39060 1754 aa23.2■■□□□ 1.3
SNAPC3-207ENST00000610884 KIF16BQ96L93 1317 aa23.2■■□□□ 1.3
SNAPC3-207ENST00000610884 RNMTO43148 476 aaKnown RBP23.2■■□□□ 1.3
SNAPC3-207ENST00000610884 ANXA1P04083 346 aa23.2■■□□□ 1.3
SNAPC3-207ENST00000610884 NOP58Q9Y2X3 529 aaKnown RBP23.2■■□□□ 1.3
SNAPC3-207ENST00000610884 NUTM2BA6NNL0 878 aaPredicted RBP23.19■■□□□ 1.3
SNAPC3-207ENST00000610884 BTBD11A6QL63 1104 aa23.19■■□□□ 1.3
SNAPC3-207ENST00000610884 NUTM2EB1AL46 878 aaPredicted RBP23.19■■□□□ 1.3
SNAPC3-207ENST00000610884 IPO8O15397 1037 aaKnown RBP23.19■■□□□ 1.3
SNAPC3-207ENST00000610884 TATP17735 454 aaPredicted RBP23.19■■□□□ 1.3
SNAPC3-207ENST00000610884 NUTM2AQ8IVF1 878 aaPredicted RBP23.19■■□□□ 1.3
SNAPC3-207ENST00000610884 BTG4Q9NY30 223 aa23.19■■□□□ 1.3
SNAPC3-207ENST00000610884 HTATSF1O43719 755 aaKnown RBP23.19■■□□□ 1.3
SNAPC3-207ENST00000610884 AMOTQ4VCS5 1084 aa23.18■■□□□ 1.3
SNAPC3-207ENST00000610884 CYP27B1O15528 508 aa23.18■■□□□ 1.3
SNAPC3-207ENST00000610884 ROBO1Q9Y6N7 1651 aa23.17■■□□□ 1.3
SNAPC3-207ENST00000610884 LTBP4Q8N2S1 1624 aa23.17■■□□□ 1.3
SNAPC3-207ENST00000610884 NFATC2IPQ8NCF5 419 aa23.17■■□□□ 1.3
SNAPC3-207ENST00000610884 ZNF428Q96B54 188 aa23.17■■□□□ 1.3
SNAPC3-207ENST00000610884 CRYBG1Q9Y4K1 1723 aa23.17■■□□□ 1.3
SNAPC3-207ENST00000610884 SLC4A10Q6U841 1118 aa23.16■■□□□ 1.3
SNAPC3-207ENST00000610884 DDX54Q8TDD1 881 aaKnown RBP23.16■■□□□ 1.3
SNAPC3-207ENST00000610884 CEMIPQ8WUJ3 1361 aa23.16■■□□□ 1.3
SNAPC3-207ENST00000610884 CPDO75976 1380 aa23.15■■□□□ 1.3
SNAPC3-207ENST00000610884 CENPQQ7L2Z9 268 aaPredicted RBP23.14■■□□□ 1.29
SNAPC3-207ENST00000610884 PHKG2P15735 406 aa23.13■■□□□ 1.29
SNAPC3-207ENST00000610884 PHAXQ9H814 394 aaKnown RBP23.13■■□□□ 1.29
SNAPC3-207ENST00000610884 WDR17Q8IZU2 1322 aa23.13■■□□□ 1.29
SNAPC3-207ENST00000610884 EIF4A1P60842 406 aaKnown RBP23.12■■□□□ 1.29
SNAPC3-207ENST00000610884 UBAP1LF5GYI3 381 aa23.11■■□□□ 1.29
SNAPC3-207ENST00000610884 DDX19BQ9UMR2 479 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms