RNA–Protein interactions for RNA: ENST00000596778.1

AC003973.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC003973.2, Length 1,394 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003973.2-201ENST00000596778 CRB1P82279 1406 aa9.04□□□□□ -0.96
AC003973.2-201ENST00000596778 NCAPD2Q15021 1401 aa9.04□□□□□ -0.96
AC003973.2-201ENST00000596778 HOXC9P31274 260 aa9.04□□□□□ -0.96
AC003973.2-201ENST00000596778 MORC1Q86VD1 984 aa9.04□□□□□ -0.96
AC003973.2-201ENST00000596778 ERBB3P21860 1342 aa9.04□□□□□ -0.96
AC003973.2-201ENST00000596778 WDR17Q8IZU2 1322 aa9.04□□□□□ -0.96
AC003973.2-201ENST00000596778 RBM6P78332 1123 aaKnown RBP9.03□□□□□ -0.96
AC003973.2-201ENST00000596778 BARGINQ6ZT62 677 aa9.03□□□□□ -0.96
AC003973.2-201ENST00000596778 SPDYE1Q8NFV5 336 aaPredicted RBP9.03□□□□□ -0.96
AC003973.2-201ENST00000596778 GJD4Q96KN9 370 aaPredicted RBP9.03□□□□□ -0.96
AC003973.2-201ENST00000596778 POLKQ9UBT6 870 aa9.03□□□□□ -0.96
AC003973.2-201ENST00000596778 AXIN2Q9Y2T1 843 aa9.03□□□□□ -0.96
AC003973.2-201ENST00000596778 SPATA31A5Q5VU36 1347 aa9.03□□□□□ -0.96
AC003973.2-201ENST00000596778 SPATA31A7Q8IWB4 1347 aa9.03□□□□□ -0.96
AC003973.2-201ENST00000596778 PEAK1Q9H792 1746 aa9.03□□□□□ -0.96
AC003973.2-201ENST00000596778 MAP2P11137 1827 aaKnown RBP9.02□□□□□ -0.96
AC003973.2-201ENST00000596778 GLI3P10071 1580 aa9.02□□□□□ -0.97
AC003973.2-201ENST00000596778 RALBP1Q15311 655 aa9.02□□□□□ -0.97
AC003973.2-201ENST00000596778 CARD10Q9BWT7 1032 aa9.02□□□□□ -0.97
AC003973.2-201ENST00000596778 QTRT2Q9H974 415 aaKnown RBP9.02□□□□□ -0.97
AC003973.2-201ENST00000596778 SPATA31A1Q5TZJ5 1347 aa9.02□□□□□ -0.97
AC003973.2-201ENST00000596778 THSD7AQ9UPZ6 1657 aa9.01□□□□□ -0.97
AC003973.2-201ENST00000596778 DDX10Q13206 875 aaKnown RBP9.01□□□□□ -0.97
AC003973.2-201ENST00000596778 CHRNA2Q15822 529 aa9.01□□□□□ -0.97
AC003973.2-201ENST00000596778 CDCA7Q9BWT1 371 aaPredicted RBP9.01□□□□□ -0.97
AC003973.2-201ENST00000596778 RXRBP28702 533 aa9□□□□□ -0.97
AC003973.2-201ENST00000596778 AMPHP49418 695 aa9□□□□□ -0.97
AC003973.2-201ENST00000596778 RRS1Q15050 365 aaKnown RBP9□□□□□ -0.97
AC003973.2-201ENST00000596778 POTEAQ6S8J7 498 aa9□□□□□ -0.97
AC003973.2-201ENST00000596778 RGPD5Q99666 1765 aa9□□□□□ -0.97
AC003973.2-201ENST00000596778 EVA1CP58658 441 aa8.99□□□□□ -0.97
AC003973.2-201ENST00000596778 TCP11L2Q8N4U5 519 aa8.99□□□□□ -0.97
AC003973.2-201ENST00000596778 ANKRD24Q8TF21 1146 aa8.99□□□□□ -0.97
AC003973.2-201ENST00000596778 EMILIN1Q9Y6C2 1016 aa8.99□□□□□ -0.97
AC003973.2-201ENST00000596778 DISP2A7MBM2 1401 aa8.99□□□□□ -0.97
AC003973.2-201ENST00000596778 PARP4Q9UKK3 1724 aaKnown RBP8.99□□□□□ -0.97
AC003973.2-201ENST00000596778 COL3A1P02461 1466 aaPredicted RBP8.99□□□□□ -0.97
AC003973.2-201ENST00000596778 RGPD1P0DJD0 1748 aa8.99□□□□□ -0.97
AC003973.2-201ENST00000596778 CC2D1BQ5T0F9 858 aaKnown RBP8.99□□□□□ -0.97
AC003973.2-201ENST00000596778 LARP1Q6PKG0 1096 aaKnown RBP8.99□□□□□ -0.97
AC003973.2-201ENST00000596778 WNK3Q9BYP7 1800 aa8.99□□□□□ -0.97
AC003973.2-201ENST00000596778 BCL9O00512 1426 aa8.98□□□□□ -0.97
AC003973.2-201ENST00000596778 KDRP35968 1356 aa8.98□□□□□ -0.97
AC003973.2-201ENST00000596778 SOX12O15370 315 aa8.98□□□□□ -0.97
AC003973.2-201ENST00000596778 PPP2R1AP30153 589 aa8.98□□□□□ -0.97
AC003973.2-201ENST00000596778 MMRN1Q13201 1228 aa8.98□□□□□ -0.97
AC003973.2-201ENST00000596778 HSP90AB2PQ58FF8 381 aa8.98□□□□□ -0.97
AC003973.2-201ENST00000596778 PLCD3Q8N3E9 789 aa8.98□□□□□ -0.97
AC003973.2-201ENST00000596778 PRKRIP1Q9H875 184 aaPredicted RBP8.98□□□□□ -0.97
AC003973.2-201ENST00000596778 RGS12O14924 1447 aa8.97□□□□□ -0.97
AC003973.2-201ENST00000596778 IGSF1Q8N6C5 1336 aa8.97□□□□□ -0.97
AC003973.2-201ENST00000596778 MYBBP1AQ9BQG0 1328 aaKnown RBP8.97□□□□□ -0.97
AC003973.2-201ENST00000596778 FBLN1P23142 703 aa8.97□□□□□ -0.97
AC003973.2-201ENST00000596778 MTHFSP49914 203 aa8.97□□□□□ -0.97
AC003973.2-201ENST00000596778 TOM1L2Q6ZVM7 507 aa8.97□□□□□ -0.97
AC003973.2-201ENST00000596778 STRN4Q9NRL3 753 aa8.97□□□□□ -0.97
AC003973.2-201ENST00000596778 PLEKHG5O94827 1062 aa8.96□□□□□ -0.98
AC003973.2-201ENST00000596778 IL13P35225 146 aa8.96□□□□□ -0.98
AC003973.2-201ENST00000596778 EIF4A2Q14240 407 aaKnown RBP8.96□□□□□ -0.98
AC003973.2-201ENST00000596778 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.96□□□□□ -0.98
AC003973.2-201ENST00000596778 CIZ1Q9ULV3 898 aaPredicted RBP8.96□□□□□ -0.98
AC003973.2-201ENST00000596778 CSB-PGBD3P0DP91 1061 aa8.95□□□□□ -0.98
AC003973.2-201ENST00000596778 TNNT2P45379 298 aaPredicted RBP8.95□□□□□ -0.98
AC003973.2-201ENST00000596778 NBPF6Q5VWK0 638 aa8.95□□□□□ -0.98
AC003973.2-201ENST00000596778 NBPF4Q96M43 638 aa8.95□□□□□ -0.98
AC003973.2-201ENST00000596778 CFAP53Q96M91 514 aa8.95□□□□□ -0.98
AC003973.2-201ENST00000596778 OVOS2A0A0G2JMS6 1433 aa8.94□□□□□ -0.98
AC003973.2-201ENST00000596778 TNS2Q63HR2 1409 aa8.94□□□□□ -0.98
AC003973.2-201ENST00000596778 LRRC37A3O60309 1634 aa8.94□□□□□ -0.98
AC003973.2-201ENST00000596778 DIAPH1O60610 1272 aaKnown RBP8.94□□□□□ -0.98
AC003973.2-201ENST00000596778 IL2RBP14784 551 aa8.94□□□□□ -0.98
AC003973.2-201ENST00000596778 NLRP2Q9NX02 1062 aa8.94□□□□□ -0.98
AC003973.2-201ENST00000596778 PKD1L3Q7Z443 1732 aa8.93□□□□□ -0.98
AC003973.2-201ENST00000596778 ZBTB7CA1YPR0 619 aa8.93□□□□□ -0.98
AC003973.2-201ENST00000596778 PPM1GO15355 546 aaPredicted RBP8.93□□□□□ -0.98
AC003973.2-201ENST00000596778 FAM98CQ17RN3 349 aaKnown RBP8.93□□□□□ -0.98
AC003973.2-201ENST00000596778 SEPT12Q8IYM1 358 aa8.93□□□□□ -0.98
AC003973.2-201ENST00000596778 EYA1Q99502 592 aa8.93□□□□□ -0.98
AC003973.2-201ENST00000596778 CCDC9Q9Y3X0 531 aaKnown RBP8.93□□□□□ -0.98
AC003973.2-201ENST00000596778 NUDCQ9Y266 331 aa8.92□□□□□ -0.98
AC003973.2-201ENST00000596778 RGPD2P0DJD1 1756 aa8.92□□□□□ -0.98
AC003973.2-201ENST00000596778 MEGF6O75095 1541 aa8.92□□□□□ -0.98
AC003973.2-201ENST00000596778 ANP32CO43423 234 aa8.91□□□□□ -0.98
AC003973.2-201ENST00000596778 DDB1Q16531 1140 aa8.91□□□□□ -0.98
AC003973.2-201ENST00000596778 RAPGEF4Q8WZA2 1011 aa8.91□□□□□ -0.98
AC003973.2-201ENST00000596778 EXOC5O00471 708 aa8.9□□□□□ -0.98
AC003973.2-201ENST00000596778 FCHSD2O94868 740 aa8.9□□□□□ -0.98
AC003973.2-201ENST00000596778 AMOTQ4VCS5 1084 aa8.9□□□□□ -0.98
AC003973.2-201ENST00000596778 KRT27Q7Z3Y8 459 aa8.9□□□□□ -0.98
AC003973.2-201ENST00000596778 CCDC125Q86Z20 511 aa8.9□□□□□ -0.98
AC003973.2-201ENST00000596778 HS6ST3Q8IZP7 471 aa8.9□□□□□ -0.98
AC003973.2-201ENST00000596778 LTV1Q96GA3 475 aaPredicted RBP8.9□□□□□ -0.98
AC003973.2-201ENST00000596778 BRWD3Q6RI45 1802 aa8.9□□□□□ -0.98
AC003973.2-201ENST00000596778 SHANK3Q9BYB0 1731 aa8.9□□□□□ -0.99
AC003973.2-201ENST00000596778 TATP17735 454 aaPredicted RBP8.89□□□□□ -0.99
AC003973.2-201ENST00000596778 NKX1-1Q15270 411 aaPredicted RBP8.89□□□□□ -0.99
AC003973.2-201ENST00000596778 FAM196AQ6ZSG2 479 aa8.89□□□□□ -0.99
AC003973.2-201ENST00000596778 PNNQ9H307 717 aaKnown RBP8.89□□□□□ -0.99
AC003973.2-201ENST00000596778 USP35Q9P2H5 1018 aa8.89□□□□□ -0.99
AC003973.2-201ENST00000596778 PCDH11XQ9BZA7 1347 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms