RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 CUEDC1Q9NWM3 386 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-227ENST00000554491 MYO15BQ96JP2 1530 aa7.91□□□□□ -1.14
ATXN3-227ENST00000554491 CUX2O14529 1486 aa7.9□□□□□ -1.14
ATXN3-227ENST00000554491 ZNF385CQ66K41 422 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-227ENST00000554491 ADAMTS8Q9UP79 889 aa7.9□□□□□ -1.14
ATXN3-227ENST00000554491 RHOQP17081 205 aa7.89□□□□□ -1.15
ATXN3-227ENST00000554491 KCNMA1Q12791 1236 aa7.89□□□□□ -1.15
ATXN3-227ENST00000554491 LYSMD3Q7Z3D4 306 aa7.89□□□□□ -1.15
ATXN3-227ENST00000554491 PRICKLE2Q7Z3G6 844 aa7.89□□□□□ -1.15
ATXN3-227ENST00000554491 GPR37L1O60883 481 aa7.88□□□□□ -1.15
ATXN3-227ENST00000554491 SLURP2P0DP57 97 aa7.88□□□□□ -1.15
ATXN3-227ENST00000554491 SVOPQ8N4V2 548 aa7.88□□□□□ -1.15
ATXN3-227ENST00000554491 ATP5J2-PTCD1G3V325 749 aa7.87□□□□□ -1.15
ATXN3-227ENST00000554491 MEN1O00255 615 aa7.87□□□□□ -1.15
ATXN3-227ENST00000554491 RNF144AP50876 292 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-227ENST00000554491 BRPF1P55201 1214 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-227ENST00000554491 A0A1W2PRU2 124 aa7.86□□□□□ -1.15
ATXN3-227ENST00000554491 SCTRP47872 440 aa7.86□□□□□ -1.15
ATXN3-227ENST00000554491 GAS6Q14393 721 aa7.86□□□□□ -1.15
ATXN3-227ENST00000554491 KCTD17Q8N5Z5 321 aa7.86□□□□□ -1.15
ATXN3-227ENST00000554491 ERVK-9P63128 1117 aa7.85□□□□□ -1.15
ATXN3-227ENST00000554491 ARHGEF15O94989 841 aa7.84□□□□□ -1.15
ATXN3-227ENST00000554491 ADAMTS2O95450 1211 aa7.84□□□□□ -1.15
ATXN3-227ENST00000554491 RASSF7Q02833 373 aa7.84□□□□□ -1.15
ATXN3-227ENST00000554491 NR1H3Q13133 447 aa7.84□□□□□ -1.15
ATXN3-227ENST00000554491 CC2D2BQ6DHV5 1058 aa7.84□□□□□ -1.15
ATXN3-227ENST00000554491 MTMR14Q8NCE2 650 aa7.84□□□□□ -1.15
ATXN3-227ENST00000554491 TTBK1Q5TCY1 1321 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-227ENST00000554491 SNRKQ9NRH2 765 aa7.83□□□□□ -1.16
ATXN3-227ENST00000554491 PCDHB11Q9Y5F2 797 aa7.83□□□□□ -1.16
ATXN3-227ENST00000554491 GDF11O95390 407 aa7.82□□□□□ -1.16
ATXN3-227ENST00000554491 POU4F2Q12837 409 aa7.82□□□□□ -1.16
ATXN3-227ENST00000554491 LYPD4Q6UWN0 246 aa7.82□□□□□ -1.16
ATXN3-227ENST00000554491 TMEM151AQ8N4L1 468 aa7.82□□□□□ -1.16
ATXN3-227ENST00000554491 ZNF837Q96EG3 531 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-227ENST00000554491 GPR25O00155 361 aa7.81□□□□□ -1.16
ATXN3-227ENST00000554491 GPC1P35052 558 aa7.81□□□□□ -1.16
ATXN3-227ENST00000554491 DBN1Q16643 649 aa7.81□□□□□ -1.16
ATXN3-227ENST00000554491 RNF20Q5VTR2 975 aa7.81□□□□□ -1.16
ATXN3-227ENST00000554491 RIPOR1Q6ZS17 1223 aa7.81□□□□□ -1.16
ATXN3-227ENST00000554491 OSBPL3Q9H4L5 887 aa7.81□□□□□ -1.16
ATXN3-227ENST00000554491 SRSF11Q05519 484 aaKnown RBP7.8□□□□□ -1.16
ATXN3-227ENST00000554491 CLN3Q13286 438 aa7.8□□□□□ -1.16
ATXN3-227ENST00000554491 SLC27A3Q5K4L6 730 aa7.8□□□□□ -1.16
ATXN3-227ENST00000554491 TRIM22Q8IYM9 498 aa7.8□□□□□ -1.16
ATXN3-227ENST00000554491 BANK1Q8NDB2 785 aa7.8□□□□□ -1.16
ATXN3-227ENST00000554491 TRIM52Q96A61 297 aa7.8□□□□□ -1.16
ATXN3-227ENST00000554491 NLRP3Q96P20 1036 aa7.8□□□□□ -1.16
ATXN3-227ENST00000554491 GRIP2Q9C0E4 1043 aa7.8□□□□□ -1.16
ATXN3-227ENST00000554491 ARHGEF10LQ9HCE6 1279 aa7.8□□□□□ -1.16
ATXN3-227ENST00000554491 NDUFB9Q9Y6M9 179 aa7.8□□□□□ -1.16
ATXN3-227ENST00000554491 TRAK2O60296 914 aa7.79□□□□□ -1.16
ATXN3-227ENST00000554491 IRS1P35568 1242 aa7.79□□□□□ -1.16
ATXN3-227ENST00000554491 CYP2U1Q7Z449 544 aa7.79□□□□□ -1.16
ATXN3-227ENST00000554491 GAS2L1Q99501 681 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-227ENST00000554491 RAB6BQ9NRW1 208 aa7.79□□□□□ -1.16
ATXN3-227ENST00000554491 DYRK1BQ9Y463 629 aa7.79□□□□□ -1.16
ATXN3-227ENST00000554491 RNF225M0QZC1 329 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-227ENST00000554491 CELA2BP08218 269 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-227ENST00000554491 NBPF10Q6P3W6 841 aaKnown RBP7.78□□□□□ -1.16
ATXN3-227ENST00000554491 CCDC125Q86Z20 511 aa7.78□□□□□ -1.16
ATXN3-227ENST00000554491 NBPF15Q8N660 670 aa7.78□□□□□ -1.16
ATXN3-227ENST00000554491 GTPBP3Q969Y2 492 aaKnown RBP7.78□□□□□ -1.16
ATXN3-227ENST00000554491 MCCD1P59942 119 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-227ENST00000554491 CDCA7Q9BWT1 371 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-227ENST00000554491 SOCS7O14512 581 aa7.76□□□□□ -1.17
ATXN3-227ENST00000554491 MARSP56192 900 aaKnown RBP7.76□□□□□ -1.17
ATXN3-227ENST00000554491 GMCL1Q96IK5 515 aa7.76□□□□□ -1.17
ATXN3-227ENST00000554491 CCDC85AQ96PX6 553 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-227ENST00000554491 CEP126Q9P2H0 1117 aa7.76□□□□□ -1.17
ATXN3-227ENST00000554491 ZNF330Q9Y3S2 320 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-227ENST00000554491 SCRIBQ14160 1630 aa7.76□□□□□ -1.17
ATXN3-227ENST00000554491 IGF1RP08069 1367 aa7.75□□□□□ -1.17
ATXN3-227ENST00000554491 IL2RAP01589 272 aa7.75□□□□□ -1.17
ATXN3-227ENST00000554491 MBIPQ9NS73 344 aa7.75□□□□□ -1.17
ATXN3-227ENST00000554491 SPATA31C2B4DYI2 1134 aa7.74□□□□□ -1.17
ATXN3-227ENST00000554491 MAP3K10Q02779 954 aa7.74□□□□□ -1.17
ATXN3-227ENST00000554491 SUZ12Q15022 739 aaKnown RBP7.74□□□□□ -1.17
ATXN3-227ENST00000554491 FOXR1Q6PIV2 292 aa7.74□□□□□ -1.17
ATXN3-227ENST00000554491 TAS1R3Q7RTX0 852 aa7.74□□□□□ -1.17
ATXN3-227ENST00000554491 ZNF592Q92610 1267 aa7.74□□□□□ -1.17
ATXN3-227ENST00000554491 CNKSR1Q969H4 720 aa7.74□□□□□ -1.17
ATXN3-227ENST00000554491 ESF1Q9H501 851 aaKnown RBP7.74□□□□□ -1.17
ATXN3-227ENST00000554491 TIMMDC1Q9NPL8 285 aa7.74□□□□□ -1.17
ATXN3-227ENST00000554491 TBC1D2BQ9UPU7 963 aa7.74□□□□□ -1.17
ATXN3-227ENST00000554491 LOC100996750A0A140TA64 210 aa7.73□□□□□ -1.17
ATXN3-227ENST00000554491 H7C1W4 665 aa7.73□□□□□ -1.17
ATXN3-227ENST00000554491 WASLO00401 505 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-227ENST00000554491 THBS1P07996 1170 aa7.73□□□□□ -1.17
ATXN3-227ENST00000554491 TSGA10IPQ3SY00 556 aa7.73□□□□□ -1.17
ATXN3-227ENST00000554491 KRTAP4-6Q9BYQ5 205 aa7.73□□□□□ -1.17
ATXN3-227ENST00000554491 ERCC6Q03468 1493 aa7.73□□□□□ -1.17
ATXN3-227ENST00000554491 STAU1O95793 577 aaKnown RBP7.72□□□□□ -1.17
ATXN3-227ENST00000554491 GNRH1P01148 92 aa7.72□□□□□ -1.17
ATXN3-227ENST00000554491 F11P03951 625 aa7.72□□□□□ -1.17
ATXN3-227ENST00000554491 PHKA2P46019 1235 aa7.72□□□□□ -1.17
ATXN3-227ENST00000554491 CENPCQ03188 943 aa7.72□□□□□ -1.17
ATXN3-227ENST00000554491 WDR44Q5JSH3 913 aa7.72□□□□□ -1.17
ATXN3-227ENST00000554491 GPAT2Q6NUI2 795 aa7.72□□□□□ -1.17
ATXN3-227ENST00000554491 ACDQ96AP0 544 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms