RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 SMC4Q9NTJ3 1288 aa17.43■□□□□ 0.38
CDC27-210ENST00000533415 PHRF1Q9P1Y6 1649 aaKnown RBP17.43■□□□□ 0.38
CDC27-210ENST00000533415 RTF1Q92541 710 aaKnown RBP17.43■□□□□ 0.38
CDC27-210ENST00000533415 COG6Q9Y2V7 657 aa17.43■□□□□ 0.38
CDC27-210ENST00000533415 CCDC136Q96JN2 1154 aa17.42■□□□□ 0.38
CDC27-210ENST00000533415 NECTIN2Q92692 538 aa17.42■□□□□ 0.38
CDC27-210ENST00000533415 KIF24Q5T7B8 1368 aa17.42■□□□□ 0.38
CDC27-210ENST00000533415 ZNF853P0CG23 659 aa17.41■□□□□ 0.38
CDC27-210ENST00000533415 ZNF530Q6P9A1 599 aaPredicted RBP17.41■□□□□ 0.38
CDC27-210ENST00000533415 ROBO1Q9Y6N7 1651 aa17.41■□□□□ 0.38
CDC27-210ENST00000533415 CFAP44Q96MT7 982 aa17.4■□□□□ 0.38
CDC27-210ENST00000533415 IFT57Q9NWB7 429 aa17.4■□□□□ 0.38
CDC27-210ENST00000533415 IL16Q14005 1332 aa17.4■□□□□ 0.38
CDC27-210ENST00000533415 GNAT3A8MTJ3 354 aa17.4■□□□□ 0.38
CDC27-210ENST00000533415 GNAI1P63096 354 aa17.4■□□□□ 0.38
CDC27-210ENST00000533415 NUTM2BA6NNL0 878 aaPredicted RBP17.39■□□□□ 0.38
CDC27-210ENST00000533415 NUTM2EB1AL46 878 aaPredicted RBP17.39■□□□□ 0.38
CDC27-210ENST00000533415 ADAMTS2O95450 1211 aa17.39■□□□□ 0.38
CDC27-210ENST00000533415 LMOD3Q0VAK6 560 aa17.39■□□□□ 0.38
CDC27-210ENST00000533415 NUTM2AQ8IVF1 878 aaPredicted RBP17.39■□□□□ 0.38
CDC27-210ENST00000533415 GAS2L2Q8NHY3 880 aa17.39■□□□□ 0.38
CDC27-210ENST00000533415 NOB1Q9ULX3 412 aaKnown RBP17.39■□□□□ 0.37
CDC27-210ENST00000533415 TSPYL4Q9UJ04 414 aa17.38■□□□□ 0.37
CDC27-210ENST00000533415 CRB1P82279 1406 aa17.38■□□□□ 0.37
CDC27-210ENST00000533415 UBAP1LF5GYI3 381 aa17.38■□□□□ 0.37
CDC27-210ENST00000533415 KCNQ3O43525 872 aa17.38■□□□□ 0.37
CDC27-210ENST00000533415 VAMP4O75379 141 aa17.38■□□□□ 0.37
CDC27-210ENST00000533415 TWISTNBQ3B726 338 aaPredicted RBP17.37■□□□□ 0.37
CDC27-210ENST00000533415 LARP1Q6PKG0 1096 aaKnown RBP17.37■□□□□ 0.37
CDC27-210ENST00000533415 TOM1L2Q6ZVM7 507 aa17.37■□□□□ 0.37
CDC27-210ENST00000533415 CRYBG1Q9Y4K1 1723 aa17.37■□□□□ 0.37
CDC27-210ENST00000533415 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
CDC27-210ENST00000533415 MAP3K5Q99683 1374 aa17.36■□□□□ 0.37
CDC27-210ENST00000533415 CAMTA1Q9Y6Y1 1673 aa17.36■□□□□ 0.37
CDC27-210ENST00000533415 CHL1O00533 1208 aa17.36■□□□□ 0.37
CDC27-210ENST00000533415 COL18A1P39060 1754 aa17.36■□□□□ 0.37
CDC27-210ENST00000533415 MEGF6O75095 1541 aa17.35■□□□□ 0.37
CDC27-210ENST00000533415 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.35■□□□□ 0.37
CDC27-210ENST00000533415 RAPGEF4Q8WZA2 1011 aa17.34■□□□□ 0.37
CDC27-210ENST00000533415 BTG4Q9NY30 223 aa17.34■□□□□ 0.37
CDC27-210ENST00000533415 NHSL1Q5SYE7 1610 aa17.34■□□□□ 0.37
CDC27-210ENST00000533415 TRIM27P14373 513 aa17.34■□□□□ 0.37
CDC27-210ENST00000533415 CALD1Q05682 793 aaKnown RBP17.34■□□□□ 0.37
CDC27-210ENST00000533415 EVA1CP58658 441 aa17.33■□□□□ 0.36
CDC27-210ENST00000533415 PLEKHO1Q53GL0 409 aaPredicted RBP17.33■□□□□ 0.36
CDC27-210ENST00000533415 C1orf141Q5JVX7 400 aa17.31■□□□□ 0.36
CDC27-210ENST00000533415 ERICH6BQ5W0A0 696 aa17.31■□□□□ 0.36
CDC27-210ENST00000533415 CPDO75976 1380 aa17.3■□□□□ 0.36
CDC27-210ENST00000533415 ZKSCAN2Q63HK3 967 aa17.3■□□□□ 0.36
CDC27-210ENST00000533415 FTSJ3Q8IY81 847 aaKnown RBP17.3■□□□□ 0.36
CDC27-210ENST00000533415 MRPL50Q8N5N7 158 aaKnown RBP17.3■□□□□ 0.36
CDC27-210ENST00000533415 PRAMEF22A3QJZ6 481 aa17.3■□□□□ 0.36
CDC27-210ENST00000533415 TATP17735 454 aaPredicted RBP17.3■□□□□ 0.36
CDC27-210ENST00000533415 SLC39A6Q13433 755 aa17.3■□□□□ 0.36
CDC27-210ENST00000533415 TMEM57Q8N5G2 664 aa17.29■□□□□ 0.36
CDC27-210ENST00000533415 ABCA3Q99758 1704 aa17.29■□□□□ 0.36
CDC27-210ENST00000533415 CYP27B1O15528 508 aa17.29■□□□□ 0.36
CDC27-210ENST00000533415 AKAP4Q5JQC9 854 aa17.29■□□□□ 0.36
CDC27-210ENST00000533415 G2E3Q7L622 706 aa17.29■□□□□ 0.36
CDC27-210ENST00000533415 DDX54Q8TDD1 881 aaKnown RBP17.29■□□□□ 0.36
CDC27-210ENST00000533415 COL5A2P05997 1499 aaPredicted RBP17.28■□□□□ 0.36
CDC27-210ENST00000533415 RNMTO43148 476 aaKnown RBP17.28■□□□□ 0.36
CDC27-210ENST00000533415 TOM1O60784 492 aa17.28■□□□□ 0.36
CDC27-210ENST00000533415 ITPRIPQ8IWB1 547 aa17.28■□□□□ 0.36
CDC27-210ENST00000533415 WDR17Q8IZU2 1322 aa17.28■□□□□ 0.36
CDC27-210ENST00000533415 ANXA1P04083 346 aa17.28■□□□□ 0.36
CDC27-210ENST00000533415 TAF7Q15545 349 aaPredicted RBP17.28■□□□□ 0.36
CDC27-210ENST00000533415 DZIP1LQ8IYY4 767 aaKnown RBP17.28■□□□□ 0.36
CDC27-210ENST00000533415 EIF2S2P20042 333 aaKnown RBP17.27■□□□□ 0.36
CDC27-210ENST00000533415 TEFQ10587 303 aa17.27■□□□□ 0.36
CDC27-210ENST00000533415 ATF7IPQ6VMQ6 1270 aa17.27■□□□□ 0.36
CDC27-210ENST00000533415 FAM208AQ9UK61 1670 aaKnown RBP17.27■□□□□ 0.36
CDC27-210ENST00000533415 ZNF428Q96B54 188 aa17.27■□□□□ 0.35
CDC27-210ENST00000533415 BTBD11A6QL63 1104 aa17.26■□□□□ 0.35
CDC27-210ENST00000533415 NCAPD2Q15021 1401 aa17.26■□□□□ 0.35
CDC27-210ENST00000533415 IGHDP01880 384 aa17.25■□□□□ 0.35
CDC27-210ENST00000533415 PHKG2P15735 406 aa17.25■□□□□ 0.35
CDC27-210ENST00000533415 AMOTQ4VCS5 1084 aa17.25■□□□□ 0.35
CDC27-210ENST00000533415 NFATC2IPQ8NCF5 419 aa17.25■□□□□ 0.35
CDC27-210ENST00000533415 C1orf115Q9H7X2 142 aa17.25■□□□□ 0.35
CDC27-210ENST00000533415 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
CDC27-210ENST00000533415 PDE3AQ14432 1141 aa17.25■□□□□ 0.35
CDC27-210ENST00000533415 PCDHB15Q9Y5E8 787 aa17.25■□□□□ 0.35
CDC27-210ENST00000533415 PHLPP1O60346 1717 aa17.24■□□□□ 0.35
CDC27-210ENST00000533415 F6X3S4 739 aa17.24■□□□□ 0.35
CDC27-210ENST00000533415 CEMIPQ8WUJ3 1361 aa17.24■□□□□ 0.35
CDC27-210ENST00000533415 LMO7Q8WWI1 1683 aa17.23■□□□□ 0.35
CDC27-210ENST00000533415 CT47B1P0C2W7 299 aaPredicted RBP17.23■□□□□ 0.35
CDC27-210ENST00000533415 KDM6AO15550 1401 aaPredicted RBP17.23■□□□□ 0.35
CDC27-210ENST00000533415 HTATSF1O43719 755 aaKnown RBP17.23■□□□□ 0.35
CDC27-210ENST00000533415 PIP4K2AP48426 406 aaPredicted RBP17.23■□□□□ 0.35
CDC27-210ENST00000533415 MVPQ14764 893 aaKnown RBP17.22■□□□□ 0.35
CDC27-210ENST00000533415 ALDH1L2Q3SY69 923 aa17.22■□□□□ 0.35
CDC27-210ENST00000533415 SPG7Q9UQ90 795 aa17.21■□□□□ 0.35
CDC27-210ENST00000533415 AHDC1Q5TGY3 1603 aaPredicted RBP17.21■□□□□ 0.35
CDC27-210ENST00000533415 LRRC37A3O60309 1634 aa17.21■□□□□ 0.35
CDC27-210ENST00000533415 BCL11AQ9H165 835 aa17.21■□□□□ 0.35
CDC27-210ENST00000533415 TSHZ2Q9NRE2 1034 aa17.21■□□□□ 0.35
CDC27-210ENST00000533415 COL16A1Q07092 1604 aaPredicted RBP17.2■□□□□ 0.34
CDC27-210ENST00000533415 EIF4A1P60842 406 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms