RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 GPC1P35052 558 aa9.5□□□□□ -0.89
NSMCE2-211ENST00000523549 RASSF7Q02833 373 aa9.5□□□□□ -0.89
NSMCE2-211ENST00000523549 NEUROD2Q15784 382 aa9.5□□□□□ -0.89
NSMCE2-211ENST00000523549 PRICKLE2Q7Z3G6 844 aa9.5□□□□□ -0.89
NSMCE2-211ENST00000523549 A0A1W2PRU2 124 aa9.49□□□□□ -0.89
NSMCE2-211ENST00000523549 SOCS7O14512 581 aa9.49□□□□□ -0.89
NSMCE2-211ENST00000523549 MCCD1P59942 119 aaPredicted RBP9.49□□□□□ -0.89
NSMCE2-211ENST00000523549 GAS6Q14393 721 aa9.49□□□□□ -0.89
NSMCE2-211ENST00000523549 SVOPQ8N4V2 548 aa9.49□□□□□ -0.89
NSMCE2-211ENST00000523549 BANK1Q8NDB2 785 aa9.49□□□□□ -0.89
NSMCE2-211ENST00000523549 RHOQP17081 205 aa9.48□□□□□ -0.89
NSMCE2-211ENST00000523549 NR1H3Q13133 447 aa9.48□□□□□ -0.89
NSMCE2-211ENST00000523549 CC2D2BQ6DHV5 1058 aa9.48□□□□□ -0.89
NSMCE2-211ENST00000523549 TMEM151AQ8N4L1 468 aa9.48□□□□□ -0.89
NSMCE2-211ENST00000523549 KCTD17Q8N5Z5 321 aa9.48□□□□□ -0.89
NSMCE2-211ENST00000523549 GDF11O95390 407 aa9.47□□□□□ -0.89
NSMCE2-211ENST00000523549 ADAMTS2O95450 1211 aa9.47□□□□□ -0.89
NSMCE2-211ENST00000523549 SRSF11Q05519 484 aaKnown RBP9.47□□□□□ -0.89
NSMCE2-211ENST00000523549 RNF20Q5VTR2 975 aa9.47□□□□□ -0.89
NSMCE2-211ENST00000523549 LYPD4Q6UWN0 246 aa9.47□□□□□ -0.89
NSMCE2-211ENST00000523549 GMCL1Q96IK5 515 aa9.47□□□□□ -0.89
NSMCE2-211ENST00000523549 GRIP2Q9C0E4 1043 aa9.46□□□□□ -0.9
NSMCE2-211ENST00000523549 RNF225M0QZC1 329 aaPredicted RBP9.45□□□□□ -0.9
NSMCE2-211ENST00000523549 SCTRP47872 440 aa9.45□□□□□ -0.9
NSMCE2-211ENST00000523549 BRPF1P55201 1214 aaPredicted RBP9.45□□□□□ -0.9
NSMCE2-211ENST00000523549 DBN1Q16643 649 aa9.45□□□□□ -0.9
NSMCE2-211ENST00000523549 TRIM22Q8IYM9 498 aa9.45□□□□□ -0.9
NSMCE2-211ENST00000523549 ZNF837Q96EG3 531 aaPredicted RBP9.45□□□□□ -0.9
NSMCE2-211ENST00000523549 LOC100996750A0A140TA64 210 aa9.44□□□□□ -0.9
NSMCE2-211ENST00000523549 MEN1O00255 615 aa9.44□□□□□ -0.9
NSMCE2-211ENST00000523549 TRAK2O60296 914 aa9.44□□□□□ -0.9
NSMCE2-211ENST00000523549 MTMR14Q8NCE2 650 aa9.44□□□□□ -0.9
NSMCE2-211ENST00000523549 KRTAP4-6Q9BYQ5 205 aa9.44□□□□□ -0.9
NSMCE2-211ENST00000523549 OSBPL3Q9H4L5 887 aa9.44□□□□□ -0.9
NSMCE2-211ENST00000523549 ABCC9O60706 1549 aa9.43□□□□□ -0.9
NSMCE2-211ENST00000523549 POU4F2Q12837 409 aa9.43□□□□□ -0.9
NSMCE2-211ENST00000523549 CLN3Q13286 438 aa9.43□□□□□ -0.9
NSMCE2-211ENST00000523549 DYRK1BQ9Y463 629 aa9.43□□□□□ -0.9
NSMCE2-211ENST00000523549 CELA2BP08218 269 aaPredicted RBP9.42□□□□□ -0.9
NSMCE2-211ENST00000523549 SPATA31C2B4DYI2 1134 aa9.41□□□□□ -0.9
NSMCE2-211ENST00000523549 SLC24A1O60721 1099 aa9.41□□□□□ -0.9
NSMCE2-211ENST00000523549 WDR44Q5JSH3 913 aa9.41□□□□□ -0.9
NSMCE2-211ENST00000523549 CYP2U1Q7Z449 544 aa9.41□□□□□ -0.9
NSMCE2-211ENST00000523549 ZNF592Q92610 1267 aa9.41□□□□□ -0.9
NSMCE2-211ENST00000523549 SNRKQ9NRH2 765 aa9.41□□□□□ -0.9
NSMCE2-211ENST00000523549 MBIPQ9NS73 344 aa9.4□□□□□ -0.9
NSMCE2-211ENST00000523549 ZNF330Q9Y3S2 320 aaPredicted RBP9.4□□□□□ -0.9
NSMCE2-211ENST00000523549 PCDHB11Q9Y5F2 797 aa9.4□□□□□ -0.9
NSMCE2-211ENST00000523549 NDUFB9Q9Y6M9 179 aa9.4□□□□□ -0.9
NSMCE2-211ENST00000523549 MARSP56192 900 aaKnown RBP9.39□□□□□ -0.91
NSMCE2-211ENST00000523549 SUZ12Q15022 739 aaKnown RBP9.39□□□□□ -0.91
NSMCE2-211ENST00000523549 SLC27A3Q5K4L6 730 aa9.39□□□□□ -0.91
NSMCE2-211ENST00000523549 NBPF10Q6P3W6 841 aaKnown RBP9.39□□□□□ -0.91
NSMCE2-211ENST00000523549 NBPF15Q8N660 670 aa9.39□□□□□ -0.91
NSMCE2-211ENST00000523549 NLRP3Q96P20 1036 aa9.39□□□□□ -0.91
NSMCE2-211ENST00000523549 H7C1W4 665 aa9.38□□□□□ -0.91
NSMCE2-211ENST00000523549 GPR25O00155 361 aa9.38□□□□□ -0.91
NSMCE2-211ENST00000523549 IRS1P35568 1242 aa9.38□□□□□ -0.91
NSMCE2-211ENST00000523549 SCARF2Q96GP6 870 aaPredicted RBP9.38□□□□□ -0.91
NSMCE2-211ENST00000523549 HRH3Q9Y5N1 445 aa9.38□□□□□ -0.91
NSMCE2-211ENST00000523549 KANK3Q6NY19 840 aa9.37□□□□□ -0.91
NSMCE2-211ENST00000523549 RIPOR1Q6ZS17 1223 aa9.37□□□□□ -0.91
NSMCE2-211ENST00000523549 ARHGEF10LQ9HCE6 1279 aa9.37□□□□□ -0.91
NSMCE2-211ENST00000523549 CEP126Q9P2H0 1117 aa9.37□□□□□ -0.91
NSMCE2-211ENST00000523549 IGF1RP08069 1367 aa9.37□□□□□ -0.91
NSMCE2-211ENST00000523549 GNRH1P01148 92 aa9.36□□□□□ -0.91
NSMCE2-211ENST00000523549 FOXR1Q6PIV2 292 aa9.36□□□□□ -0.91
NSMCE2-211ENST00000523549 GTPBP3Q969Y2 492 aaKnown RBP9.36□□□□□ -0.91
NSMCE2-211ENST00000523549 GAS2L1Q99501 681 aaPredicted RBP9.36□□□□□ -0.91
NSMCE2-211ENST00000523549 ESYT1Q9BSJ8 1104 aa9.36□□□□□ -0.91
NSMCE2-211ENST00000523549 DNMT3AQ9Y6K1 912 aaPredicted RBP9.36□□□□□ -0.91
NSMCE2-211ENST00000523549 IL2RAP01589 272 aa9.35□□□□□ -0.91
NSMCE2-211ENST00000523549 MAP3K10Q02779 954 aa9.35□□□□□ -0.91
NSMCE2-211ENST00000523549 CCDC85AQ96PX6 553 aaPredicted RBP9.35□□□□□ -0.91
NSMCE2-211ENST00000523549 CDCA7Q9BWT1 371 aaPredicted RBP9.35□□□□□ -0.91
NSMCE2-211ENST00000523549 F11P03951 625 aa9.34□□□□□ -0.91
NSMCE2-211ENST00000523549 THBS1P07996 1170 aa9.34□□□□□ -0.91
NSMCE2-211ENST00000523549 CENPCQ03188 943 aa9.34□□□□□ -0.91
NSMCE2-211ENST00000523549 TAS1R3Q7RTX0 852 aa9.34□□□□□ -0.91
NSMCE2-211ENST00000523549 CNKSR1Q969H4 720 aa9.34□□□□□ -0.91
NSMCE2-211ENST00000523549 XAGE2Q96GT9 111 aa9.34□□□□□ -0.91
NSMCE2-211ENST00000523549 TIMMDC1Q9NPL8 285 aa9.34□□□□□ -0.91
NSMCE2-211ENST00000523549 ENAMQ9NRM1 1142 aa9.34□□□□□ -0.91
NSMCE2-211ENST00000523549 WASLO00401 505 aaPredicted RBP9.33□□□□□ -0.92
NSMCE2-211ENST00000523549 PHTF2Q8N3S3 785 aa9.33□□□□□ -0.92
NSMCE2-211ENST00000523549 ACDQ96AP0 544 aa9.33□□□□□ -0.92
NSMCE2-211ENST00000523549 APBB1O00213 710 aa9.32□□□□□ -0.92
NSMCE2-211ENST00000523549 BCRP11274 1271 aa9.32□□□□□ -0.92
NSMCE2-211ENST00000523549 RAB6BQ9NRW1 208 aa9.32□□□□□ -0.92
NSMCE2-211ENST00000523549 LRRC4BQ9NT99 713 aa9.32□□□□□ -0.92
NSMCE2-211ENST00000523549 TSGA10IPQ3SY00 556 aa9.31□□□□□ -0.92
NSMCE2-211ENST00000523549 TRERF1Q96PN7 1200 aa9.31□□□□□ -0.92
NSMCE2-211ENST00000523549 FHDC1Q9C0D6 1143 aaPredicted RBP9.31□□□□□ -0.92
NSMCE2-211ENST00000523549 ESF1Q9H501 851 aaKnown RBP9.31□□□□□ -0.92
NSMCE2-211ENST00000523549 IGHA1P01876 353 aa9.3□□□□□ -0.92
NSMCE2-211ENST00000523549 CFHR5Q9BXR6 569 aa9.3□□□□□ -0.92
NSMCE2-211ENST00000523549 NUCKS1Q9H1E3 243 aaKnown RBP9.3□□□□□ -0.92
NSMCE2-211ENST00000523549 CNTNAP5Q8WYK1 1306 aa9.3□□□□□ -0.92
NSMCE2-211ENST00000523549 MX2P20592 715 aa9.29□□□□□ -0.92
NSMCE2-211ENST00000523549 FOXK2Q01167 660 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms